Teleopsis dalmanni (Malaysian stalk-eyed fly): 119669007
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Entry
119669007 CDS
T09311
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119669007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tda03400
]
119669007
Enzymes [BR:
tda01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
119669007
DNA repair and recombination proteins [BR:
tda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119669007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT_2
DNA_ligase_IV
BRCT
NuDC
Motif
Other DBs
NCBI-GeneID:
119669007
NCBI-ProteinID:
XP_037934660
LinkDB
All DBs
Position
1:complement(139735790..139741206)
Genome browser
AA seq
922 aa
AA seq
DB search
MDISESIKFKDICAMLEKVKNAVNVAAKEKYLRRYYDSFCKYRHNYRQENGIGEDDSEEG
NTSFYCVLRCLIPGSDSVRPPYGLQITSLGKVYIKVLQLSEDSRDVQRLIARSYSGIRGD
YADIVHSVLSPRCKQEPSNVTLKQVHDMLDTIASDDRRNTEKVLTQLSEIASAKEQMWFI
RLLLKSMHLGIGEQKIFNILHVQAKDIFRRCSNLKRVCCLLADNKIAEASNSSNNNNIVK
EEIKIESIITVFQHIRPMLCEMFPGDIQPLMSSDVLFLETKMDGERFQLHYTNDQFKYIS
RNGVDYTSSFGENYNDGNLTPHLVSLLPIGMESIIIDGEMMVYDTNTARFCDKGENTDVK
HLGGRPHWRPCFVAYDLLYFNGCSYLDTPYIQRMTKLKELIKEEVGILQVMKPKKVSSME
DFKKIFQEALDAGEEGVVLKKQSSLYKPGIRHGGGWYKVKADYIQGLTTEFDLLVIGGFY
NRTRTFIESFLVGVLNFKGEDNYEVYSVGKVTNNTRQRIALNETLKPLWHKLTSDPPPMT
YRYVHTNPEGRPDVWIEANKSIILQIKAADLAPSSAFFLSKSLHFPRTEAWRNDKVWNEC
MTLKEFLQMCQSKKGLKKINKRELQVEDFTTNRKRLKMTATEKRKIGIKSYEKIFNAEEI
EQSSELFGNFSFCVLSGSLKEGQTVHQLKYIITENGGEIVENPIPTDSRCICVAGDITHR
IDKMIKTNRYNIVSILWLLRTTKEQEMTFRPKDMICATDEVREQFKTMYDKYGDSYTEFV
GPNELKELFDEISLEELNSFELTDEAAEELENELYKKKSPYYFRNHKAYFYSNELISQIA
KYKFQLHGGIVENINAQTEMAGIEYIFIDEVSFNKADFKDWLKKVFKSSSDYLHIVKVDW
VLQSHSKKTKLDVFDFTWHDFS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggatatatcagaatctataaaatttaaggacatctgtgccatgcttgaaaaagttaaa
aatgctgtaaatgttgcagcaaaagaaaagtacttacgacgttattatgattccttttgt
aaataccgccacaattatcgtcaagagaatggaattggggaggatgattctgaagaaggt
aatactagtttctattgtgttttacgctgccttattccaggttcggattcagtgcgtcca
ccatatggtttacagattacgtcgcttggaaaagtctatataaaagtattgcaactgtca
gaagattcacgagatgtacaacgcttgattgcacgtagctacagtgggattcgtggcgat
tacgcagatattgtacactcagtgctgtcgccacgttgcaagcaggaaccgagtaatgta
acactaaaacaggtgcatgatatgttggacacaattgcttcagatgatagaagaaatact
gagaaggtgctgacacaattatctgaaattgcatcggcaaaagaacaaatgtggttcata
cgattgctgcttaagagcatgcatctgggtataggagaacaaaagatattcaacatatta
catgtgcaagcgaaagatatttttcggcggtgctccaatttaaaacgtgtatgctgcttg
ttagcagataataaaattgcagaagctagcaattccagcaataacaataatattgtgaaa
gaagaaatcaagatcgaatcgataataactgtgtttcaacatattcgtcctatgctatgt
gaaatgtttcctggtgacatacaaccactgatgtcatcagatgtgctatttttagagacg
aaaatggatggagaacggtttcagttacattacaccaacgatcaatttaaatatatatcg
cgaaatggtgtggattatacttctagctttggtgaaaactataatgatggtaatctaaca
ccacacttggttagcctcttgcctatcggcatggaatcaattattatcgatggtgaaatg
atggtttatgatacaaatacagcacgattctgtgataaaggcgaaaacacagacgtcaag
catctaggtggacgtccgcactggcgaccttgttttgttgcctatgatttattgtatttt
aatggctgcagctaccttgatacaccgtatatacagcgcatgactaaattaaaagaatta
ataaaggaagaagtaggaatcctgcaagttatgaaacctaaaaaagtttcatctatggaa
gatttcaaaaaaatttttcaagaagcactcgacgctggtgaagagggtgtagtgcttaag
aagcaatcatctctttacaaaccaggcatacgtcacgggggtggttggtacaaagttaaa
gcagattacattcaaggtttgactacagaatttgatttactggtcattggaggtttttat
aaccggacgcgtacgtttatcgagtcatttttggttggtgttttaaattttaaaggagag
gacaactatgaagtttatagtgttggcaaggtaacaaataatacacgccagcgtatagct
ttaaatgaaacattgaagccactttggcacaaattaacttctgatccgcctccaatgacc
taccgttatgtgcatactaatccagaaggtagaccggatgtgtggattgaagcaaataaa
tcgattatattacaaataaaagctgcagatctggcgccatcctccgcctttttcctttca
aagtcgttgcattttccacgaacagaagcatggcgcaatgacaaagtgtggaatgaatgt
atgactctgaaggaattcttacaaatgtgtcagagtaaaaaaggccttaaaaagattaat
aaacgtgagttacaagttgaagatttcaccacgaatcgtaagagactgaaaatgacggca
actgaaaaacgtaaaattggcataaaatcttatgaaaaaatatttaatgctgaagagatt
gaacaaagttctgaattatttggtaacttcagtttttgcgtattaagtggatcactgaag
gaaggtcaaacagtacatcaattgaaatatattatcacagaaaatggaggcgaaatcgtt
gaaaatcctataccaaccgattcaaggtgcatatgtgttgctggcgacataacacatcgc
atagataaaatgataaaaaccaatcgttataatatagtctccatactgtggcttttaaga
actactaaagaacaagaaatgacattcaggccaaaagatatgatatgtgctactgatgaa
gtgagagaacagtttaaaaccatgtatgataaatatggtgattcatatactgaatttgtt
ggcccgaatgagttaaaggaacttttcgatgagatatccttagaagagttgaactctttc
gaattaactgatgaggctgcagaagagttggaaaatgaattgtataaaaagaaatcacca
tattactttcgtaatcataaagcctatttctatagcaatgagttaatttcgcagattgcg
aaatataaatttcaattacatggaggaattgtagaaaatataaacgcacaaactgagatg
gctggtattgagtatatatttatagatgaggttagtttcaataaagctgactttaaggat
tggttaaagaaggtttttaaaagtagttctgactatttacatatagttaaagttgattgg
gttttgcaatcacacagtaagaaaactaaactcgatgtttttgacttcacttggcatgac
ttttcttaa
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