Teleopsis dalmanni (Malaysian stalk-eyed fly): 119670543
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Entry
119670543 CDS
T09311
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119670543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tda03041
]
119670543
Enzymes [BR:
tda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119670543
Spliceosome [BR:
tda03041
]
Complex A
U2 snRNP components
U2 related factors
119670543
Complex B
119670543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
119670543
NCBI-ProteinID:
XP_037936768
LinkDB
All DBs
Position
1:complement(181522041..181526668)
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AA seq
1083 aa
AA seq
DB search
MGSEDRDRRRYRSRSKERSSRNGESRSARNGNNGSSRSNRDERKRDRDRDGDRRRDEKRR
RRTRSRSLSRDYERERERDRADRRQIEREQRDYRDREREKEWEKERERDRERERERERER
ERERERERDRDRDRDSGSRRVASPPVIIKESSSSSSEEEIDKEEEQRRLELEMIKRRERI
ERWRAERKLKELESNKKDLKSLIPPSAATAKKWSLEDESEEEDNATNDIRKEAESPPPSK
FLSIKEIKEEDEEEKYKKDKPKPKEIAIIVEEKIETKEEDDDIDPLDAYMQEVDKEVRKV
NNFISQPKKQQGVVILTGVAKKTTKTINKGELIEQNMDSLEYSSEEELEDIKDTAANLAN
KHKKELAKIDHSGVDYSSFRKNFYVEVPELVRMSQQEVEKYRADLEGIQVKGKGCPKPIK
TWAQCGVSKKEMDILRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFR
HILDQPRLEDGDGPIAIIMAPTRELCMQIGKDIRRFSKSLTLRPVCVYGGTGISEQIAEL
KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRP
DRQTVMFSATFPRQMEALARRILKRPIEVIVGGRSVVCKDVEQHVAILEDDAKFFKLLEL
LGHYQEEGSIIVFVDKQENADILLKDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGRVRL
LIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGNKGVAWTFLTNEQARYAG
DIIRALELSETEVPEDLQKLWTEYKEAQEAEGKKVHTGGGFSGKGFKFDEQEANAAKESK
KLQKAALGLADSDDEEDIEQDIDQQIEQLFAAKRTVKDTSIPVVTLASTTANTTATAAPI
VTMAGGSDKLELAKRLASKISTTKNLAPETILKGTTTAPPILTARTVVEQLAAKLNNKLN
YQPKDDEEGIAGLMPNQANSFTKYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTV
RGTYVPTGKNPPEGERKLYLAIESCSELAVQKAKREITRLIKEELLKLSSAHHVFNKNRY
KVL
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgggatcagaagatcgagaccgccgacgatacagatcgcgttctaaagagaggtcatca
agaaatggcgaaagtaggtctgcgagaaatggaaacaatggtagcagtcggagcaaccgt
gatgaacgtaagagggaccgcgatagagacggggatagacgacgcgatgaaaagagaagg
aggcgtacaagatcgaggtctttatctagggattatgaacgagaaagagaacgcgacaga
gctgacagaaggcaaatagaaagagaacagcgcgattatagagatagagaacgtgaaaaa
gaatgggagaaagaaagagaaagggatcgtgagcgagagagagagcgtgaacgtgaacgt
gaaagagaacgcgaacgtgaacgggatcgagatcgagatcgtgattcgggatcaagacgt
gtagcttctcctccggttattattaaggagtctagcagttcttcttctgaggaggaaatc
gataaagaggaagaacaacgccgtttagaattagaaatgatcaaaagaagagaacgaatc
gaacgttggagagcagaaagaaagcttaaagaattagaatccaataaaaaagatttaaaa
agtttgattccaccttcggctgccacagctaaaaaatggagtttggaagatgaatctgaa
gaggaagataatgctacaaatgatatcagaaaagaggccgaatcacctcccccatctaaa
tttttgagcatcaaagaaataaaagaagaggatgaagaagagaaatataaaaaagataaa
ccaaagccaaaggaaatcgcaataattgttgaagaaaaaattgaaacgaaagaagaggat
gatgatattgatcccttagatgcatatatgcaggaggttgataaagaagtgcgtaaggta
aataattttataagtcaacctaagaagcaacaaggagtagttatcttaactggtgttgct
aaaaaaacgacgaaaactatcaataaaggtgaattaatagaacagaatatggatagcttg
gagtattctagcgaagaagagttagaagacattaaagatacggctgcgaacttagcaaat
aagcacaaaaaagaattagctaaaattgatcactctggtgttgattactcatcttttcga
aaaaatttttatgtcgaggtaccagagttggtacgtatgtcgcaacaagaggtagaaaaa
tatcgtgctgatctagaaggtatacaagtaaaaggaaaaggctgcccgaagccaattaag
acatgggcacaatgcggtgtaagtaaaaaagaaatggacattttgcgaaaacttggattt
gagaaacctactccaatacagtgtcaagcaattccagctattatgtctggacgggattta
ataggtattgctaaaactggcagtggtaaaacgctcgcatttattttaccaatgtttagg
catatattggaccaaccgcgcttggaagatggtgatggaccaatcgcaattattatggcg
ccaacccgagaattgtgcatgcaaattggcaaagatatacgacggttttcgaaaagttta
acactgaggccagtgtgcgtatatggcggcacgggaatatctgaacaaatagctgagtta
aaacgtggtgctgaaattatagtgtgtactccaggtcgtatgatagatatgttggctgct
aattcaggtcgtgttacaaatttgcggcgtgttacatacgttgttttagatgaagcagat
cgtatgttcgatatgggttttgaaccgcaagttatgcgtataatagataatgtgaggccc
gatagacaaactgtcatgtttagtgctacatttccacgtcaaatggaagccttagctcga
cgcattttaaaaagaccaatagaagttattgtgggcggtcgttctgttgtctgcaaagat
gttgagcagcatgtagccattcttgaagatgatgctaaattctttaaattgttggaactg
ctaggacattatcaggaagagggcagtataatagtctttgttgataaacaagaaaacgca
gatatattacttaaagatctaatgaaagcatcatatccctgtatgagtttacatggtggt
atcgaccagtttgatagagattcgacgattatagactttaaatcgggaagagtgcgttta
ctgatagctacatcggtagctgcacgagggttagatgttaaagacctcatattagtggtt
aattatgatgtaccaaatcattatgaggattacgttcatagatgtggtcggactggacgt
gctggaaataaaggtgtggcatggactttcttaacgaatgaacaagcccgatatgcaggt
gatataatccgcgctctagaactttcagaaacagaagtaccagaagatttgcaaaaatta
tggacagaatataaagaagcacaagaagcagaaggcaagaaagttcatactggcggtggc
tttagtggaaaaggttttaaattcgatgaacaagaagcaaatgcggctaaagaaagcaaa
aagctacaaaaagctgctttaggtttagctgattctgatgatgaagaagatattgaacaa
gatatagatcaacaaatagaacaattatttgcagcaaagagaactgtaaaagatacttct
ataccggttgtaacattagcttctacaacagcaaacactacagctactgccgcacctata
gtaacaatggctggcggttcagacaaacttgaacttgcaaaacgtcttgcttcgaaaata
agtacaactaaaaatcttgcaccggaaacaatactaaaaggcactactacagctccgcca
atattaacggcacgaactgtagttgaacagttagctgctaaattaaataataagttaaac
tatcaacctaaggatgatgaggaaggtattgcaggattaatgccgaatcaagccaactca
tttacaaaatatgaagaagaattagaaataaacgactttcctcagcaagcacgctggaaa
gttacatctaaagaagctttggcacaaatttctgaatattctgaagcaggtttaacagta
cgtggtacttatgtgcctactggtaagaatccgccagaaggagaacgtaaactatatcta
gcaattgaaagttgcagtgaattggcggtgcaaaaagcaaaacgtgagatcacacgacta
ataaaagaagaattgctaaaacttagttctgcacatcacgtctttaacaaaaacagatat
aaggttctctag
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