Teleopsis dalmanni (Malaysian stalk-eyed fly): 119673378
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Entry
119673378 CDS
T09311
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03022
Basal transcription factors
tda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119673378
09124 Replication and repair
03420 Nucleotide excision repair
119673378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tda03021
]
119673378
03400 DNA repair and recombination proteins [BR:
tda03400
]
119673378
Transcription machinery [BR:
tda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119673378
DNA repair and recombination proteins [BR:
tda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119673378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
119673378
NCBI-ProteinID:
XP_037940570
LinkDB
All DBs
Position
1:96204859..96206552
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AA seq
487 aa
AA seq
DB search
MSDTKFIEGRLESALISIPKPCILECRNLYEYLRALKPELLEKLYSYPPICLAVYQELSE
IARQFVIRTLFVEQAVPQAVVASWGSQHFAKELAEAIASLSALCVWRVTPIPGGLSGWEL
CPNFKKNLRVALLGGGKPWLMSYTSDKHSKPRDIYSLDKYAASRWNCVLKFMVGPETCNK
LGCDNELISPDAVRILLHSNLMKRIEKDGVRITSQGFQFLLFDTQTQVWTFMLQYLDACE
ERGLSLPECLSLLFQLSFSTLGRNYSSDGMSSRMLTFLQHLREFGLVFQRKRKEGRFYPT
RLALNMGNKNRISSVSNEAKKSEGYIIVETNYRVYAYTNDQLKVSILALFTELIYRFPNL
VVGVLTRDSVRQALRGGITADQIISYLKQYAHANMKIDLDPNASSALPPTVLDQMRLWEL
ERNRFTFTEGVVYNQFLSQADFITLRDYANSSDALIWQNERTRTMVVTRNGHDDVKRFWK
RYSKNVG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataccaagttcatcgaaggaagattagagtctgctcttatttctattccaaaa
ccttgtatacttgaatgtagaaacttatacgagtacttgcgagcgcttaaaccggagctt
cttgaaaaactctacagttatccaccaatatgtttagcagtatatcaggagttatccgaa
attgcacggcaatttgtgatacgtactttgtttgtagaacaagcagtgcctcaagctgtt
gtagcttcgtggggatctcagcactttgcgaaagaattggcagaagcaattgcgtctctt
tcagcgctgtgtgtatggagagttacaccaattcctggtggattatcaggttgggaactt
tgccccaactttaagaagaatttaagagttgccttgttgggcggtggaaaaccatggctc
atgtcatacacgtcggataaacattcaaaaccccgggatatttactctctggataagtac
gcagcatcacgttggaattgtgttttgaaatttatggtaggaccagaaacatgtaataaa
cttggatgcgataatgaactaataagtccagatgcagttcgcatattgctccattcaaat
ttaatgaaacgcattgagaaagatggtgtgaggataacaagtcagggatttcagttctta
ttatttgatacgcaaacacaagtttggacttttatgctacaatatttggatgcttgtgaa
gaacgtggactttccttgccagaatgtctttctctactatttcaattaagttttagtaca
ttaggtcgcaattacagttctgatggaatgagttccaggatgctaacatttttacagcat
ttaagagaatttggattggtattccaacgcaagaggaaggaaggtcggttttacccaact
agactagctcttaatatgggtaacaaaaatagaatttctagtgtaagtaatgaagcgaaa
aaatctgaaggatacataatagttgagacaaattaccgcgtgtacgcttataccaatgac
caacttaaagtatctattttagcactttttactgaattaatatatcgttttccgaattta
gtcgttggtgttcttacaagagattccgttcggcaagctctacgtggtggaattaccgcc
gaccaaattataagttatttgaaacaatatgcacacgctaacatgaaaatagatttagat
cctaacgcgagctcagctttacccccaactgttctcgaccaaatgcgactatgggaattg
gagcgcaatcgttttactttcacggaaggcgttgtttataatcagtttttgtctcaagcc
gattttataactctgcgagattatgctaattcatctgatgctctaatttggcaaaacgaa
agaacacgtacaatggtcgttactagaaatggtcacgacgatgtaaaacgattttggaaa
cgttattccaaaaatgtcggataa
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