Teleopsis dalmanni (Malaysian stalk-eyed fly): 119676137
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Entry
119676137 CDS
T09311
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03013
Nucleocytoplasmic transport
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119676137
09122 Translation
03013 Nucleocytoplasmic transport
119676137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119676137
03041 Spliceosome [BR:
tda03041
]
119676137
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119676137
Spliceosome [BR:
tda03041
]
Complex C
Other components
EJC/TREX
119676137
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119676137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
119676137
NCBI-ProteinID:
XP_037943298
LinkDB
All DBs
Position
2:170028983..170043704
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AA seq
702 aa
AA seq
DB search
MSCTCKCWHGLKAPNLTTGTGTARSNTAPYVINKNNLNPKPPCAECKQKPEQQQSMTCMS
ALTGNHSGNCLSAHCTATATPAATPFMAVPAITVPPPAQTTQPQIVLGGMTANTMNSTFY
PTFGNTAQNNNSMYFIPFAYPNIVPMATPMPSPMLSANTQQNSIQGCPHTNALNHSRTSG
PTTTAISNRRHNVNSESTTKRYVPPLKATVAAAISEHQKHTNTVLDAFDGFKLDCGLKRR
KTDTEKKVDDKAQSTSKSTMKNNRQDEDNENIFKSDIFFAKYLTNPKLLALQLSDSKFRR
ATLVQFLILFQYLQSKVKFKTDSSVLTSSQELYIETTQTRVYKLIEETPPNGNQFLRTVQ
HILNREEIWNKWKNEGCKEIRKPDDVQNNTKGKEEPQEDNATTSGSGAVVNDSNVKEESS
DESFIKQIQPHTRKRLLGDILRESYNSNRYYLGHPLLTELWNLAPDNLSACKSEDRNFLP
EFEVYLNNKNDRSDSSSWRALRLLARQSPHFFTTFNSSSSYKIPDYLENMRRRIIREKLE
NAKPATSATVTNGQVSSNGSTLENETMTLTDAEQEAEPELGADEDIEKNEDDRNAHSKPL
VATHEQIEEIAPLIGDDWKKLGKKLGYTPDELEFFETEHTEPNTACVTMLVNWFADDDDA
TLDNWAYMMEGLEINEAATAVKAMIERLSTKSSKTDVEVISD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgcacgtgcaaatgttggcatggattaaaagcaccaaacctgacaactggtacc
ggaactgcacgcagtaacaccgcaccatatgttataaataaaaacaatttgaacccgaaa
ccgccttgtgcagagtgcaaacagaaaccagaacaacaacaatcaatgacttgtatgtct
gctctgacgggtaatcatagcggtaattgtctgtcagcgcattgtacggcaactgctaca
ccagcagcaacaccatttatggctgttccggcaatcacagtaccgccgccggcacaaact
acccagccgcaaatcgttttaggcggtatgactgctaatacaatgaattccacattttat
ccaacgtttggaaacacagcacaaaataacaattccatgtattttataccttttgcatat
ccaaatatcgttcctatggccacgcctatgccatcacctatgctttctgcaaatactcaa
caaaattcaattcaaggttgtcctcatacaaatgcattaaatcattctagaacatcggga
cccacaacgactgcaatatcgaatcgaagacataacgtaaacagcgaatcgacaacgaaa
agatatgtgcctccattgaaagctacagtagcagcagcgatatcggaacatcaaaaacat
acaaatactgttttggatgcctttgatggcttcaaacttgattgtggactaaaaaggagg
aaaactgacactgaaaaaaaggtagatgacaaagcacagtcaacatcaaaatcaactatg
aaaaataacaggcaggatgaggacaatgaaaatatttttaaatcggatatattctttgca
aaatatctaacaaatccaaaacttttagcactgcagttgtccgattcgaagtttcggcgc
gcaactctagtgcaatttctcattcttttccaatatctgcagtcaaaagtgaaatttaag
acagattcaagtgttttgacatcatcgcaggagttatacatagagactactcagactagg
gtatataagctgatagaagaaactccaccaaatggtaaccagttcttgcgaactgtccaa
cacattctaaatcgagaagagatatggaataagtggaaaaatgaaggttgtaaggaaatt
agaaaacctgacgacgttcaaaataacacaaaaggaaaggaggaacctcaagaagacaac
gccacaacaagtggtagtggtgcagtagttaatgacagtaatgtgaaagaagaatctagc
gatgaatcatttattaaacagattcaaccacacacaaggaaacggctcttgggcgatata
cttagggaaagttataactcaaatagatactatttaggccatccattgctaactgaactc
tggaatttagcaccggataatctatcagcatgtaaaagtgaagatcgtaatttcttacct
gaattcgaagtatatctcaataacaaaaacgatagaagtgactcttcatcatggcgagca
ttgcgtttgttggcaagacaatctccacactttttcaccacatttaattcgtcatccagt
tataaaataccggattacttggagaatatgcgccgcagaattattagggaaaagttagaa
aatgccaaaccagccacaagtgcaacagtaaccaatggtcaagtcagcagcaacggatca
actcttgaaaatgaaactatgacactaactgacgctgaacaagaagctgagcctgagttg
ggcgctgatgaagatattgaaaaaaacgaagacgatagaaatgcccattcgaaacctctt
gtggctacacacgaacaaatcgaagagattgctccacttattggcgatgattggaagaag
ttaggtaagaaactaggttacactccagacgagttggaatttttcgaaacagaacacact
gaacctaatactgcctgtgttacaatgttggttaattggtttgcggatgatgacgatgcc
acacttgacaattgggcttacatgatggaaggcctagaaatcaatgaagctgcgacagct
gtcaaggcaatgatcgaacgtttatcgacaaaaagtagtaaaacagacgtagaagtaatt
tcggactaa
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