Triticum dicoccoides (wild emmer wheat): 119292311
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Entry
119292311 CDS
T07278
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119292311
09122 Translation
03013 Nucleocytoplasmic transport
119292311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119292311
03041 Spliceosome [BR:
tdc03041
]
119292311
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119292311
Spliceosome [BR:
tdc03041
]
Complex C
Other components
EJC/TREX
119292311
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119292311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
119292311
NCBI-ProteinID:
XP_037427053
LinkDB
All DBs
Position
4B:complement(676753933..676762112)
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AA seq
629 aa
AA seq
DB search
MAEPSPPPPPPPSNKGLRVLLAKDRAPTSSPXEPFAWSQGVFRTALSRNEAPEAFALQAV
QEAIKPQKQTVLVLEENQTLENALRRLLQELVSSAVQSGKGIMQYGNSLDSGESNCLITH
LLDIMLYLCERGHVEGGMVFQLLEDLTDMSTIKDCKDVFGYIESKQDVLGKQELFGRGKL
VMLRTCNQLLRRLSKSNDVVFCGRIIMFLAHFFPLSERSALNIKGVFNTSNETKYEKDAT
DGISVDFNFYQTLWSLQEHFRNPALTTTNPTKWQKFASNLTVVLSTFEAQPLSDADGKHN
NLEQEEDAAFNIKYLTSSKLMGLELKDASFRRHILVQCLIFFDYLKAPGKTDKEGPSESM
KEEIKSCEERVKNLLEMIPPKGKEFLQSIEHILEREKNWVWWKRDGCPAFEKQPFEKKSS
QAGARKRKPRWRLGNKELAQLWKWAELNPDALTDSDRVRMPSVTEYWKPLAEDMDTSAGI
EEEYHHKNNRVYCWKGLRFQARQDLEGFSRFCDYGIEGVVPPELLPPDVRAKFNSKPGEK
AKRPKREDTRGTSAHPKEPQVAAATPETDGGGSGGDQEEGVVPMDSDNGAGEDGQKRSPG
EVSGPESGQCDAEDDGEDNTKSAHSRDRR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccctcgccgccgccgccgccgccgccgtccaacaaaggcctccgggtcctc
ctcgccaaggaccgcgcccccacttcctccccctncgaaccgtttgcttggtcgcaggga
gtgttccggaccgcgctgtccaggaacgaggcccccgaggctttcgccctccaggcggtg
caggaagcgattaagcctcagaagcaaacggtgctggtgctagaggagaaccagaccttg
gagaatgctcttcgaaggctgctgcaggaacttgtgtcatctgcagttcaatcgggtaaa
ggaattatgcagtatggaaactcattggatagcggggaaagtaattgcctgataacacat
cttcttgatatcatgctttacctttgtgaaagagggcatgttgagggtggcatggtattc
cagttattggaagatctgacggatatgtcaactatcaaagactgcaaagatgtctttggg
tatattgagagcaagcaggatgtcttggggaagcaagagctatttgggcgtggcaagttg
gttatgctgaggacttgcaaccaactacttcgaagactttcaaagtcgaacgatgtggtg
ttctgcggacgcattatcatgttcctggcacatttcttcccgttgtcagagcgttcagct
ctcaatatcaagggagttttcaacacatcaaatgaaactaagtatgagaaagatgccact
gacggaatttctgttgatttcaacttctaccagaccctgtggagtctgcaggagcatttc
cgtaacccagctttgactactacaaatccaacaaaatggcaaaagttcgcgtccaattta
acggtcgtgttaagcacatttgaagctcagcctctcagcgatgctgacggaaaacataat
aatcttgagcaggaggaagatgctgctttcaatattaagtaccttactagcagtaaattg
atgggtttggagttgaaagacgcaagttttcgacgccacatccttgtccaatgccttata
ttttttgactatctcaaggcgcctggaaagactgacaaggaaggtccatccgagagcatg
aaagaggaaatcaaatcttgtgaagagcgtgtcaagaatcttctggagatgattccaccg
aaagggaaggaattcctacaaagcattgagcatattcttgagcgggagaaaaactgggta
tggtggaagagagatggatgtccagcatttgaaaaacagccttttgaaaagaagtccagt
caagccggagccagaaaacgtaagccaaggtggagattgggaaacaaggaacttgcgcaa
ctgtggaaatgggcagaattaaaccctgatgctttgactgactctgaccgagtccgcatg
ccatcagttacagaatattggaaaccacttgcagaagatatggacacatctgctggaatt
gaggaggagtatcaccacaaaaataatcgtgtttattgctggaaaggtttacggtttcaa
gccagacaagatttggaaggattttctcgattttgtgactacgggatcgaaggggttgta
cctcccgagctgctgccgcccgacgtgcgcgccaaattcaattctaagcccggggagaag
gccaaacggcctaaacgggaggacacaagaggcacttcagcccaccccaaggagccacag
gttgccgcggccacgcccgagacggacggcggtggcagcgggggcgaccaggaggaaggc
gttgtgccgatggactccgacaacggtgcgggagaggacggccagaagcgcagccccggc
gaggtctcggggcccgagtccgggcagtgcgatgccgaggacgatggggaagataacacc
aaaagcgcgcatagtagagatcgtcggtag
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