Triticum dicoccoides (wild emmer wheat): 119304376
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Entry
119304376 CDS
T07278
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119304376
09122 Translation
03013 Nucleocytoplasmic transport
119304376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119304376
03041 Spliceosome [BR:
tdc03041
]
119304376
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119304376
Spliceosome [BR:
tdc03041
]
Complex C
Other components
EJC/TREX
119304376
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119304376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
119304376
NCBI-ProteinID:
XP_037437456
LinkDB
All DBs
Position
5A:complement(710133719..710141803)
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AA seq
636 aa
AA seq
DB search
MAEPSPPPPPPSNSGLRILLAKDRAPTSSPSAPAAVSSHADRDRIIGVFRTALSRNEAPE
AFALQAVQEAIKPQKQTVLVLEENQTLENALRRLLQELVSSAVQSGKGIMQYGNSLDSGE
SNCLITRLLDIMLYLCERGHVEGGMVFQLLEDLTDMSTIKDCKDVFGYIESKQDVLGKQE
LFGRGKLVMLRTCNQLLRRLSKSNDVVFCGRIIMFLAHFFPLSERSALNIKGVFNTSNET
KYEKDATDGISVDFNFYQTLWSLQEHFRNPSLTTTNPTKWQKFASNLTVVLSTFEAQPLS
DADGKHNNLEQEEDAAFNIKYLTSSKLMGLELKDASFRRHILVQCLIFFDYLKAPGKSDK
EGPSESMKEEIKSCEERVKNLLEMIPPKGKEFLQSIEHILEREKNWVWWKRDGCPAFEKQ
PFEKKSGQAGARKRKPRWRLGNKELAQLWKWAELNPDALTDSDRVRMPSVTEYWKPLAED
MDTSAGIEEEYHHKNNRVYCWKGLRFQARQDLEGFSRFCDYGIEGVVPPELLPPDVRAKF
NSKPGEKAKRPKREDTKGTSAHPREPQVAAATPETDGGGSGGDQEEGAVPMDSDNGAGED
GQKRSPGEVSGPESGQCEAEDDGEDSTKSAHSRDRR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccctcgccgccgccgccgccgccgtccaactccggcctccggatcctcctc
gccaaggaccgggcgcccacttcctctccctccgcgcccgccgccgtctccagccacgcc
gaccgcgaccgcatcatcggagtgttccggacggcgctgtccaggaacgaggcccccgaa
gctttcgccctccaggcagttcaggaagcgattaagcctcagaagcaaacggtgctggtt
ctagaggagaaccagaccttggagaatgctcttcgaaggctgctgcaggaacttgtgtca
tctgcagttcaatcgggtaaaggaattatgcagtatggaaactcattggatagcggggaa
agtaattgcctgataacacgtcttcttgatatcatgctttacctttgtgaaagagggcat
gttgagggtggcatggtattccagttattggaagatctgacggatatgtcaactatcaaa
gactgcaaagatgtctttgggtatattgagagcaagcaggatgtcttggggaagcaagag
ctatttgggcgtggcaagttggttatgctgaggacttgcaaccaactacttcgaagactt
tcaaagtcgaacgatgtggtgttctgtggacgcattatcatgttcctggcacatttcttc
ccgttgtcagagcgttcagctctcaatatcaagggagttttcaacacatcaaatgaaact
aagtatgagaaagatgccactgacggaatttctgttgatttcaacttctaccagaccctt
tggagtttgcaggagcatttcaggaacccttctttgactactacaaatccaacaaaatgg
caaaagtttgcatctaatttaacggtcgtgttgagcacatttgaagctcagcctctcagc
gatgctgatggaaaacataataatcttgagcaggaggaagatgctgcctttaatattaag
taccttactagcagtaaattgatgggtttggagttgaaagacgcaagttttcgacgccac
atccttgtccaatgccttatattttttgactatctcaaggcccctggaaagagtgacaaa
gaaggtccatccgagagcatgaaagaggaaatcaaatcctgtgaagagcgtgtcaagaat
cttctggagatgattccaccgaaagggaaggagttcctacaaagcatcgagcatattctt
gagcgggagaaaaactgggtatggtggaagagagatggatgcccagcatttgaaaaacaa
ccttttgaaaagaagtcaggacaagctggagccagaaaacgtaagccaaggtggagattg
ggaaacaaggaacttgctcaactgtggaaatgggcagaattaaaccctgatgctttgact
gattctgaccgagtccgcatgccatccgttacagaatattggaaaccacttgcagaagat
atggacacatctgccggaattgaggaggagtatcatcacaaaaataaccgcgtttattgt
tggaaaggtttacggtttcaagcccgacaagatctggaaggattttctcgattttgtgac
tacgggatcgaaggggttgtacctcccgagctgttgccacccgacgtgcgcgccaaattc
aattcaaagcccggggagaaggccaaacggcctaaacgggaagacacaaaaggcacttca
gctcaccccagggagccacaggttgccgcggccacgcccgagacggacggtggcggcagc
gggggcgaccaggaggaaggcgcggtgccgatggactccgacaatggcgcaggggaggac
ggccagaagcgcagccccggcgaggtctctgggcctgagtcagggcagtgcgaggctgag
gacgatggggaagatagcacgaaaagcgcgcatagtagagatcgtcggtag
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integrated database retrieval system
