Triticum dicoccoides (wild emmer wheat): 119325472
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Entry
119325472 CDS
T07278
Name
(RefSeq) probable RNA-dependent RNA polymerase 1
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdc03036
]
119325472
Enzymes [BR:
tdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
119325472
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
119325472
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdRP
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
119325472
NCBI-ProteinID:
XP_037455112
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All DBs
Position
6B:578131989..578141559
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AA seq
1116 aa
AA seq
DB search
MGGKTIQVSGFPSTVNADHVKDLLEQIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEA
HASLVLNAARRNALRTGSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCLLKEKVLSVL
WSGTNVSVEFGFAMKRIDFCLISNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAA
PKIYEQNIRRSGSMYDDPLFNYFRDDTDDQWTRTTDFTPLASIGQSYILCLELPHICYLP
NIREYFVYYEVHDDVFHLQRGYSYSSNTCFVPVVKSQYFTDVPYEILFKINHLVQNGTLS
GPTLDDNFYRLVSPRYECIDHVKRALEKMSYLKKTCLNPTKWLSEQYKKLQRSRYVLRLP
NITLDDDGLVYVYRVQITPAKVYFYGPEINVSNRVVRNYAADLDNFLRISFVDEDCEKLR
STDLSQRSAPGNNTRRTALYNRVLSVLSNGITIGDKHFDFLAFSSSQLRDNSAWMFASRP
GLSASDIREWMGNFRNIRNVAKYAARLGQSCSSSTETLKVHKYEVKEAPDVTNGTKYVFS
DGIGTISADFADEVSKKCNLTRFTPSAFQIRYGGYKGVVAVDPTSHWKLYLRKSMSKFQS
DNITLDVLAYSKYQPCFLNRQLITLLSTLGVRDSIFELKQQEAVKQLNRMVAEPQAAIGA
IELMPMGEITNIVKELLLCGYQPDVEPFVSMLLQTFRASKLLELKTRSRIFVPKGRAMMG
CLDETRTLKYGQVFIQASNSANDRGKSIVTGKVIVAKNPCIHPGDIRILQAVHSPLLGHM
VNCVVFPQLGPRPHPNECSGSDLDGDIYFVSWDPDLIPTRMVAPMDYTPAPTETLDHDVM
IEEVHEYFTNYIVNESLGIIANAHVVFADREILKAESTPCIKLAELFSIAVDYPKTGVPA
QIPPELHVKEYPDFMEKLDRATYVSEGVIGKLYREIKKQNPHIGHFTKDVARRSYDADLI
VDGYQDFITEAVWFKEQYDFKLGNLMEHYGINSEAEIISGCIIKMAKNFTKKNDADAIRL
AVKSLRKEARSWFNEMGSDESGGGHEALDAKASAWYHVTYHPEYWGCYNEGYDHRPHFIS
FPWCVYDKLILIKQQKNFVRKMLDLENRMRRSAIFG
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaagactattcaggtgtcagggtttccttcaactgtcaatgctgaccatgtc
aaggatttgttggaacaaattgttggtactggcaacgtctttgcgatcaagctcaggcct
ccaaagaacatctctgcaaactcaaaatcgtttgccattgttcagttccagtccgaggca
catgcttcgctggtgttgaatgcggcccgacggaatgcactaaggactggaagtaatcat
ctgaaggcccgatacgcagagcgtgacattgttccgagaccaagaactacaatttttaat
ctacaggatgcaacactgcattttggctgccttctgaaggaaaaagttctatctgttctg
tggagcggaacaaatgtttccgttgagtttggatttgctatgaagaggattgacttttgc
ctgatctccaactcgaagaaatacaaacttgaactctcctacgagagcatatgggagatc
cagcttcatcgtccacctgggttgcaaaaaaagttccttctgattcaggttcaggctgct
ccgaaaatttacgaacaaaatatacgccgctctggttctatgtacgatgatcctttattc
aactattttagggatgatacagatgaccagtggaccagaacaactgattttactccatta
gccagcattgggcaatcatatatcctatgtctggagctaccacatatttgttatctcccg
aacatccgagagtacttcgtttactatgaagtacacgatgacgtcttccatctccagcgt
ggatattcatattcaagcaatacttgctttgttccagttgtgaaatctcaatatttcact
gatgtcccctatgagatactctttaagatcaaccacttggttcagaatgggacacttagt
ggaccaacacttgatgacaacttctaccgtctggtcagcccaagatatgaatgtattgac
catgtaaagcgtgcacttgaaaagatgtcatacctaaaaaagacttgtttgaatccaaca
aagtggttatctgaacaatacaaaaaacttcagagatcacgctacgtgttaagattaccg
aacataactctggatgatgatgggttggtatatgtctacagggtgcaaattactcctgcg
aaagtgtacttttatggtcctgagattaatgtctcgaatcgtgttgtacggaattatgct
gctgatttggataacttccttcggatttcgtttgttgatgaggactgtgagaagcttcgt
tcaactgatttatcacaacgctctgctccaggaaataatacaaggaggactgctctttat
aacagagttctttcggtcctttcaaatggcattactatcggtgacaagcactttgacttt
ctggctttttcttcaagccagctccgagataactctgcatggatgtttgcttctcgcccg
gggttatctgccagtgacatcagggagtggatggggaacttccgtaatattagaaatgtg
gcaaagtatgctgcaaggcttggtcagtcttgtagttcctcaacagaaactttgaaagtg
cataagtatgaggtgaaagaagctccagatgtaacaaacggtacaaagtatgtattctca
gatggaattggaaccatttcagctgattttgcagatgaagtgtctaagaagtgcaacttg
acccgctttactccctccgctttccaaataaggtatggaggttacaaaggtgttgtcgct
gttgatccaacatcacactggaaactatatttaagaaaaagcatgtcaaagtttcagtca
gataacatcacactagatgttcttgcatacagcaagtaccagccatgtttcctgaaccgg
cagttaatcactcttctttcaacactcggagtcagagatagcatatttgaactgaaacaa
caagaagctgtgaagcagttgaacagaatggtagctgaaccacaagctgctattggtgca
attgagcttatgcccatgggagaaattaccaacattgttaaagagttgttgttatgtggt
taccagcctgatgttgaaccatttgtttctatgcttctacaaacatttagagcatccaag
ctgctagaattgaaaacgaggtcaaggatatttgtcccaaaaggacgagcaatgatggga
tgcctagatgaaacccgcacactgaagtacggacaggtattcattcaagcttctaatagt
gcaaatgaccgtggaaagtccatcgtaactggaaaagttatcgttgcgaaaaacccttgc
atccaccctggtgatatccgtattctccaggctgttcatagtcctcttctgggccacatg
gttaactgtgttgtctttccacagctggggccaaggcctcatcctaatgaatgttcaggg
agtgatctggatggggacatatactttgtttcatgggacccagatctcattccaactcgt
atggtggcgcctatggactatactcctgcaccaacagaaacattagatcatgatgttatg
attgaggaagtacatgagtatttcacaaattacatagttaacgagagtctgggaatcatt
gccaacgcgcacgtagtctttgcggatagggaaatcttgaaggctgaaagtacaccatgc
attaagctggcagagctcttctccattgctgttgattatccaaagacaggagttccggct
caaattccgcctgaactacatgtgaaggagtacccagatttcatggagaagctcgacagg
gctacctatgtatccgagggagtaatagggaagctctaccgggaaattaagaagcagaac
cctcacattggacacttcacaaaggatgtggcaaggcggtcttatgacgctgatttgata
gttgatggctaccaagacttcattaccgaagctgtgtggttcaaggaacagtatgacttc
aagttgggtaatctgatggagcactacggaataaatagcgaggctgagataataagtgga
tgcatcattaagatggcaaagaattttaccaagaagaacgacgccgatgctatcagactg
gcggtgaaatctttgcggaaggaagcaaggtcatggttcaacgagatgggttcagatgag
agcggaggtggtcacgaggccttggacgccaaggcatccgcttggtatcatgttacctat
cacccggagtactggggttgctacaatgaaggatatgatcaccggccacacttcatcagt
tttccgtggtgtgtctatgacaagctgattctcatcaagcagcagaagaactttgtcagg
aagatgcttgatctcgagaacagaatgagacggagcgccatattcgggtga
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