Triticum dicoccoides (wild emmer wheat): 119336758
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Entry
119336758 CDS
T07278
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119336758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119336758
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119336758
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119336758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
119336758
NCBI-ProteinID:
XP_037464731
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All DBs
Position
7B:complement(365840147..365841414)
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AA seq
294 aa
AA seq
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MSAPPPPASSDDDGKPADEEGVEIREVWANNLEAEFAVIRDIVDDYPYIAMDTEFPGIVC
RPLGSFRSNDEYNYATLKANVDMLSLIQLGLTLSDENGALPARGTGGRPCTWQFNFRGFD
PRSDPANADSIDLLRNSGIDFDRFTTEGADTGHFAELLMSSGVLLNAELQWVTFHSGYDF
GYLLKLLTGRNLPDTMPGFFDLIRIYFPVLYDIKHLMKYCGSLHGGLSKLGELLGVQRVG
ICHQAGSDSLLTLRCFKKLKEAYFRGSTENYAGVLYGLISDGGENRPPAALLIE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccgccgccccccgcctcctccgatgatgatggtaagcccgccgacgaggag
ggcgtagagatccgcgaggtatgggcgaacaacctcgaggcggagttcgccgtgatccgt
gacatcgtcgacgattacccgtacatcgccatggacaccgagttcccgggcatcgtgtgc
cgcccgctcgggagctttcgctccaatgacgagtacaactacgccaccctcaaggccaac
gtcgacatgctgagcctcatccagcttggtctcaccctctccgacgagaacggcgcactc
ccggccaggggcaccggggggcgcccctgcacctggcagttcaactttcggggcttcgat
ccgcgctcagaccccgccaacgctgactccatcgacctgctacgcaacagcgggatcgac
ttcgaccgcttcaccaccgagggtgctgacacaggccacttcgccgagctgctcatgtcg
tcgggcgtcctgctcaacgctgagctccagtgggtcacattccacagtgggtacgacttc
gggtacctgctcaagctgctaaccgggcggaacctacccgacaccatgcctggattcttt
gacctcatcagaatctacttccctgtgctgtacgacatcaagcatctcatgaagtactgc
ggcagcctccatggtggcttgagcaagcttggtgagctacttggtgtccaacgtgtgggg
atctgccaccaggctgggtccgactcgctgctgaccttgcggtgcttcaaaaagctgaag
gaggcatatttcagaggatcgaccgagaattatgccggtgtattgtatggtcttatttct
gatggtggggagaacagaccaccagcagctctgctcatcgaatga
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