Torulaspora delbrueckii: TDEL_0A02660
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Entry
TDEL_0A02660 CDS
T02236
Symbol
TDEL0A02660
Name
(RefSeq) hypothetical protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03013
Nucleocytoplasmic transport
tdl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TDEL_0A02660 (TDEL0A02660)
03015 mRNA surveillance pathway
TDEL_0A02660 (TDEL0A02660)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0A02660 (TDEL0A02660)
Enzymes [BR:
tdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TDEL_0A02660 (TDEL0A02660)
5.6.2.5 RNA 5'-3' helicase
TDEL_0A02660 (TDEL0A02660)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
TDEL_0A02660 (TDEL0A02660)
mRNA cycle factors
Common to processing body (P body) and stress granule
TDEL_0A02660 (TDEL0A02660)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
UvrD-helicase
ResIII
SLFN-g3_helicase
DEAD
Helicase_RecD
PhoH
nSTAND3
AAA_22
T2SSE
AAA_16
ATPase
Motif
Other DBs
NCBI-GeneID:
11503159
NCBI-ProteinID:
XP_003678809
UniProt:
G8ZLV4
LinkDB
All DBs
Position
1:complement(480727..483453)
Genome browser
AA seq
908 aa
AA seq
DB search
MHRRTMNADEELLEDEVAVLPTSQHACAYCGIDSPVSVIRCNGCSRWFCNSKHGTASSHI
VNHLVLSHHNVVSLHPDSDLGDTVLECYNCGCKNVFLLGFVSARGEAVVVLLCRVPCAQN
KNANWDTDQWQPLIEDRQFLNWVAEEPTEEQKLSARLITPSQMSKLEAKWKSNKDATIND
IDAPEEQEEIPPVLLKYQDAYEYQRSYGPLIKLEADYDKQLKESQALEHISVTWSLALNN
RHLASFALSTFESNELKVAVGDEMVLRYSGLQHPEWEGRGYIVRLPNSMQDEFTLELKPS
KQPPPTHLGTGFTAEFIWKGTSYDRMQDALKKFALDKKSISGFLYYKILGHQIVDIQFEV
NLPKEFSIKHFAQLNASQSHAVEHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKMHNERI
LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVARSSKGELKKLL
RLKEEVGELSIGDTKKFVKLVRKTESEILKKADVVCCTCVGAGDKRLDTRFRTVLIDEST
QASEPECLIPIVKGAKQIILVGDHQQLGPVILERKAGDAGLKQSLFERLIALGHVPLRLE
VQYRMNPYLSDFPSNVFYEGSLQNGVTIEQRTVTNSTFPWPIHGVPMMFWANYGREEISA
NGTSYLNRIEAMNCERIITRLFKDGVKPEQIGVITPYEGQRAFILQYMQMNGSLDRDLYL
SVEVASVDAFQGREKDYIILSCVRANEQQIIGFLSDPRRLNVGLTRAKYGLVILGNPRAL
STNALWNNLLIHFREKGCLVEGSLNNLQLCTVQLTRNRPNKNNTNKFPFTVDTAGFSSVQ
DFDTQSLMSFGGEVDPFKGTGLAPENELSSFLNNQMWNADNFASYEGRASTQENDTERLS
KGIHSLNI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggagaacgatgaacgcggatgaagaactgttggaagacgaggttgctgtacta
ccgacgtcccagcatgcgtgtgcttactgtgggatagattcgcccgtgagcgttattcgt
tgtaacggttgttcacgatggttttgcaattccaagcacggcacggcaagctcgcatatc
gtgaatcacctggttttgtctcaccacaacgtcgtttcgttgcatccggactcggatctt
ggtgatacggtgcttgaatgttacaactgtggttgtaagaatgtatttcttctcgggttt
gtctctgctagaggtgaagcagtcgtggttttactatgtcgggtcccctgtgcgcagaat
aagaatgctaattgggatactgatcagtggcaaccactaatcgaggatcgtcaattcttg
aactgggtcgccgaagaacctaccgaggaacaaaagttgagcgcaaggctcatcactcct
tcacaaatgtcaaaacttgaagcaaaatggaaatctaacaaggatgctaccatcaatgat
atcgatgcaccagaggaacaggaggaaattccacccgttttactcaagtaccaggatgca
tacgagtaccaaaggtcttatggaccactgatcaaacttgaggcagattatgacaaacag
cttaaagaatcacaggcattagagcatatttccgttacatggtccctcgctcttaacaac
aggcacctagcgtcctttgccttgtcaacttttgaatctaatgaattgaaagttgctgta
ggtgatgaaatggtactacgttactctggtctgcaacaccccgaatgggagggaagagga
tatatcgttcgtttaccaaacagcatgcaggacgaattcactttggaattgaaacccagt
aaacaaccacctccaacgcatttggggactggttttactgcagaattcatttggaaaggt
acttcctatgatagaatgcaagacgctttgaaaaaatttgctcttgataagaaatctatt
tcaggtttcctctactataagatcctgggtcaccagattgtggatatccaatttgaagtt
aatttgcctaaggagttttccatcaaacatttcgctcaactaaatgcatcgcaatctcac
gcagtggaacatgttttacaaagacctttgtcattaatacagggacctccaggtaccggt
aagactgtcacttcggcaacaatagtttaccacttgtcaaagatgcacaacgaacgaatt
ctagtgtgtgcaccctccaacgtcgcagtcgaccatttggctgctaagttgcgtgatctt
ggtttaaaggtcgttagactgactgccaaaagtcgtgaggatgttgaaagttctgtatcg
aatttggcactacataacttggtcgcaagatcttccaagggtgaactgaagaaattactc
agactaaaggaggaagtgggtgaactctccattggtgatactaagaaattcgtgaaattg
gttagaaagacagagtccgagatcctgaaaaaggctgatgtcgtttgttgtacctgtgtt
ggtgctggtgataagagactcgataccaggtttagaacagtgttgatcgacgagagtact
caggcatctgaaccagaatgtttgattccaatcgtcaagggcgcaaagcaaatcattttg
gtcggtgatcatcaacagctgggtccagttattctcgagcgtaaagctggtgatgctggt
ttgaaacagtctttgttcgaaaggctcattgcactagggcatgttcctttgcgtctagag
gtgcaataccgtatgaatccatacttgagtgatttcccaagtaatgtgttttatgaaggt
agtttgcaaaatggtgttaccatcgaacaacgtaccgttaccaacagcactttcccttgg
cctattcacggagtacccatgatgttctgggccaactatggtagagaagagatctctgcg
aatggtacttcgtacctgaatagaatcgaagcaatgaactgtgaacgtatcataacaaga
ttgttcaaagatggtgttaaaccggaacagataggtgttatcaccccatatgagggtcag
agagcttttatcttacagtatatgcaaatgaacggatccctggatagagacctctacctg
agtgtcgaggtggcgtctgtcgatgcatttcaaggaagggaaaaggattatatcatattg
tcctgcgtacgtgcaaatgagcagcaaattattggatttttgagcgatcctcgccgtttg
aacgtcggccttactcgtgccaaatacggactggtcatcttgggaaacccaagagctttg
tctactaacgcgttgtggaataacctattaattcatttccgtgaaaagggctgtctcgtc
gaaggctcactaaacaacctacagttgtgcaccgtgcagttaacgaggaacaggccaaac
aagaataacaccaataagtttccattcacagtcgatacagcaggcttctctagcgttcaa
gattttgatacacaaagtttaatgtcctttggtggtgaggtagatcctttcaaagggaca
ggacttgcgccagaaaatgaactctcatccttcctgaacaaccaaatgtggaacgctgac
aatttcgcctcgtacgaaggtcgtgcatcgactcaagagaatgacactgagcggctaagt
aaaggcatacattccctaaatatataa
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