Triplophysa dalaica: 130411633
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Entry
130411633 CDS
T09616
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130411633 (ddx4)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130411633 (ddx4)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130411633 (ddx4)
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130411633
NCBI-ProteinID:
XP_056592395
EnsemblRapid:
ENSTDLG00000005544
LinkDB
All DBs
Position
22:complement(3793254..3806138)
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AA seq
635 aa
AA seq
DB search
MEDWEEDKSPVVSCSSTFGLNSSGASGGFKSCFSESAGHQNGNEDEGSSWRKPAAEGFRG
RGGRGGSRGRGGFRNAFSSEAEDGNGNSDGYKGGEGRGRRGRGGFRDGNEGDSDRKGFGR
GGFRGGDEERFSKVSTADREDKENLNENAGPKVVYVPPPPPEDENSIFSQFATGINFNKY
DDISVDVSGSNPPKAILTFEEAGLCESLNKNVAKSGYVKPTPVQKHGIAIISAGRDLMAC
AQTGSGKTAAFLLPILQQLMTDGVAASKFSEVQEPEAIIVAPTRELINQIYMEARKFAYG
TCVRPVVVYGGINTGYTIREVLKGCNVLCGTPGRLLDIIGRGKVGLSKVRYLVLDEADRM
LDMGFEPDMRKLVGSPGMPSKEDRQTLMFSATFPEDIQRLAAEFLKVDYMFLAVGVVGGA
CSDVEQSIIQVTQFSKREQLLDLLRTTGKDRTMVFVETKRSADFIATFLCQENVATTSIH
GDREQREREKALLDFRTGQCPVLVATSVAARGLDIEHVQHVVNFDLPSSIDEYVHRIGRT
GRCGNLGRAVSFFDPEPDTPLARSLVKVLSGAQQEVPKWLEEIAFSAHGTTGFNPRGKVF
ASTDSRKGGSFKTDRQESSGPSPAAAAPEDDDEWE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaagactgggaggaagataagagtcctgttgtatcctgcagctccacttttggtctg
aactctagtggtgcaagtggaggattcaagagctgcttttcagaaagtgctggacatcaa
aatggaaatgaagatgaaggcagctcatggaggaagcctgctgcagagggattcagaggc
agaggaggaagaggaggatcacgaggcagaggaggattcagaaatgccttctcatcagaa
gctgaagatggcaatggcaacagtgatggttataaaggaggggaggggcgaggaagacga
ggtcgtggtggtttccgtgacggtaatgaaggtgattctgacaggaagggcttcggacga
ggaggttttcgaggcggtgatgaagaaaggttttccaaggtctccacagcagacagagag
gataaagaaaatctcaatgaaaatgccggacccaaggtggtttatgtacctccaccacca
ccggaggatgagaactccatattttcccagtttgccacaggcattaactttaacaagtat
gatgatatatctgtggatgtgagcggcagcaatcctccaaaagccattctgacttttgag
gaagcaggactttgtgagtcactgaacaagaatgttgcaaagtctggatacgtcaaaccc
acccctgtccagaaacacggcattgccattatatctgcgggaagagatctgatggcttgt
gcccagacgggatccggaaaaacggcggctttcctgctgcccatccttcagcagctcatg
acagacggtgtggccgccagtaaattcagcgaggtgcaggaacccgaggccattattgtg
gctcctaccagagagctcatcaatcagatctatatggaggccaggaagtttgcatatggg
acttgtgtgcgtcctgtggtggtctacggtgggataaacactggatacactattcgggag
gtgttgaagggttgcaacgttttatgtggaactcccggaagattgcttgacattattggt
cgtggaaaggtcggcttaagtaaggtccggtatctggttctggatgaagcagacagaatg
ctggacatgggctttgagccagacatgcgcaagttggtgggatctccaggaatgccttca
aaagaagatcggcaaaccctcatgttcagcgcgactttccctgaagatattcaaaggctg
gcagcagagtttttgaaggtggactacatgtttcttgcggttggtgtggtgggtggagcc
tgcagtgatgtggagcagagcatcattcaggtgactcagttctccaagagagaacagctg
ctggacctcctcagaaccacaggcaaagatcgcacaatggtctttgttgaaaccaaaaga
agtgctgatttcatagcaacctttctttgtcaagagaatgtggctacgacaagcatccac
ggcgaccgtgaacagcgagaacgtgagaaagctctccttgatttccgcacgggccaatgt
cctgtgctcgtggccacatccgtcgccgccagaggactggacatcgaacacgtccagcat
gtggtgaactttgatttgcccagcagcatcgacgaatatgtgcatcgcattggtagaacc
gggcgctgtggaaacctcggacgagccgtgtccttctttgacccagagcccgacactcca
ctggctcgctctctagtcaaagtcctctcaggggctcagcaggaggttcccaaatggctg
gaggagatagcattcagtgctcatggaacaacaggttttaacccgcgtggaaaagtgttt
gcatccacagactcacgcaagggtggctccttcaagacggatcggcaagaaagttctggt
ccgagcccagccgctgctgcccctgaagatgacgatgaatgggaataa
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