Triplophysa dalaica: 130415898
Help
Entry
130415898 CDS
T09616
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130415898
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130415898
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_5
DUF6825
Laminin_I
DUF4726
DUF4407
Motif
Other DBs
NCBI-GeneID:
130415898
NCBI-ProteinID:
XP_056597874
EnsemblRapid:
ENSTDLG00000006403
LinkDB
All DBs
Position
25:3045135..3050274
Genome browser
AA seq
539 aa
AA seq
DB search
MASISVDHDQLMCSVCLDLLKDPVTLHCGHTYCMRCITDCWDQDDQTGIYSCPQCRQTFS
PRPVLGKNVVFAEMVEKLKKTKLSDVCYAGAGDVECDVCTGRKHKAIKSCLTCLKSYCQT
HLERHEEFLSGDSHKIVSVTRKLKEMICPQHQKLLEVFCRTDQQCICLMCLMDKHKNHDT
VSAAAQRTDEEKHLKETQRKFQEKIHQRERDVQELRDAVEGHKRCAQTAVEDCEMMLTEV
MSLIGRRRSEVTQLIRDQETAAVSRAEGLLERLKQEIDDLRRRDAELDKISHTDDHITFL
QSFQSLSAPPESPDDISVTFLFSFDAVRESVRQLRHKLQDFCTQHMRKISVTHTITEPRI
REHFLQYSHQLTLDLNTVNKRLSLSERNTKITNTNTLQQYPDHPDRFNFVCQVLCRESVC
GRCYWEIERTGVVCISVSYKSIMRKGGAECWFGSNDQSWSLICFDSSYTFRHNNINTELP
VKIRCDRIGVYVDERAGILSFYSVSDTMTLIHSISTTFTHPLYPGFNVHPNSSVKLCDL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggccagtatttcagtggatcacgatcagttgatgtgttcagtgtgtttggatctactg
aaggatccagtgacgcttcactgtggacacacttactgtatgagatgtatcacagactgc
tgggatcaggacgatcagacgggaatctacagctgccctcagtgcagacaaaccttcagc
cctcggcctgttctagggaagaatgtggtgtttgctgaaatggtggagaaactgaagaag
accaaactttctgatgtgtgttacgctggagctggagatgtggagtgtgacgtctgtact
ggaagaaaacacaaagccatcaaatcctgtctgacgtgtctgaagtcttactgtcaaact
catcttgaacgtcatgaggaatttctctctggagattcacacaaaatagtgagtgtgact
agaaaactgaaggagatgatctgccctcaacatcagaagcttctggaggttttctgtcgt
actgatcagcagtgcatttgtttgatgtgtttgatggataaacataaaaaccacgacaca
gtttcagcggcagcacagaggacagatgaagagaaacacttgaaggagacgcagagaaag
tttcaagagaagatccatcagagagagagagatgttcaggagctgagagacgctgtggag
ggtcataagcggtgtgcacagacagcagtggaggactgtgagatgatgttgactgaagtg
atgtcattgattgggagaagacgctctgaggtgacacagctgatcagagatcaggagacg
gctgcagtgagtcgagctgaaggactcttggagcgactcaagcaggagattgatgatctg
aggaggagagacgctgagctggacaagatttcacacacagatgatcacatcactttccta
cagagttttcagtctctctctgcacctcctgaatctccagacgacatcagtgtcactttc
ctcttttcttttgatgctgtgagagaatctgtccgtcagctgagacacaaactgcaggat
ttctgcacacagcacatgagaaagatctccgtcacacacaccatcactgagcccaggatc
agagagcacttcctacaatattctcatcagttgactctggatctaaacacagtgaataaa
cgtctcagtctgtctgagagaaacacaaagatcacaaacactaacacactccagcagtat
cctgatcatccagacagatttaattttgtgtgtcaggtgttgtgtagagagagtgtgtgt
ggacgctgttactgggagattgagaggactggtgttgtgtgtatatcagtgtcatataag
agcatcatgaggaagggaggggctgagtgttggtttggatctaatgatcagtcctggagt
ttgatctgctttgactctagttacacattcagacacaataacatcaacactgaactccct
gtaaagatcagatgtgatagaataggagtgtatgtggatgagagagcaggaattctgtcc
ttctacagcgtctctgacacaatgaccctcatccacagcatcagcaccacattcactcat
cctctctatcctggatttaatgttcatcccaattcatcagtgaaactgtgtgatctatag
DBGET
integrated database retrieval system
