Triplophysa dalaica: 130415972
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Entry
130415972 CDS
T09616
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130415972
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130415972
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_5
DUF3829
DUF4407
U-box
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
130415972
NCBI-ProteinID:
XP_056597992
EnsemblRapid:
ENSTDLG00000021149
LinkDB
All DBs
Position
25:3972671..3975990
Genome browser
AA seq
538 aa
AA seq
DB search
MAEASFSEDQLMCSVCLDLLKDPVTLHCGHTYCMRCITDCWDQDDQTGIYSCPQCRQTFS
PRPVLGKNVVVAEMVEKLKKTKLSDVCYAGAGDVECDVCTGRKHKAIKSCLTCLKSYCQT
HLERHEEFHSGDSHKIVSVTRKLKEMICPQHQKLLEVFCRTDQQCICLMCLMDKHKNHDT
VSAAAQRTDEEKHLKETQRKFQEKIHQREKDVQELRDAVEGHKRCAQTAVEDCEMMLTEV
MSLIERRRSEVTQLIRDQETAAVSRAEGLLERLKQEIDDLRRRDAELDKISHTDDHITFL
QSFQSLSAPPESPDDISVTFLFSFDDVRESVRQLRDKLQDFCTQHMRKISVTHTITEPRI
REHFLQYSHQLTLDLNTVNELLSLSERNTKITNTETLQQYPDHPDRFDVRQVLCRESVCG
RCYWEIERTGVVCISVSYKSIIRKGWSECWFGYNDQSWSLICYDSSYTFKHNNINTELPV
KIRCDRIGVYVDERAGILSFYSVSDTMTLIHSISTTFTHPLYPGFYFNINSSVKLCDL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgagtttttcagaggatcagttgatgtgttcagtgtgtttggatctactg
aaggatccagtgacgcttcactgtggacacacttactgtatgagatgtatcacagactgc
tgggatcaggacgatcagacgggaatctacagctgccctcagtgcagacaaaccttcagc
cctcggcctgttctagggaagaatgtggtggttgctgaaatggtggagaaactgaagaag
accaaactttctgatgtgtgttacgctggagctggagatgtggagtgtgacgtctgtact
ggaagaaaacacaaagccatcaaatcctgtctgacgtgtctgaagtcttactgtcaaact
catcttgaacgtcatgaggaatttcactctggagattcacacaaaatagtgagtgtgact
agaaaactgaaggagatgatctgccctcaacatcagaagcttctggaggttttctgtcgt
actgatcagcagtgcatttgtttgatgtgtttgatggataaacataaaaaccacgacaca
gtttcagcggcagcacagaggacagatgaagagaaacacttgaaggagacgcagagaaag
tttcaggagaagatccatcagagagagaaagatgttcaggagctgagagacgctgtggag
ggtcataagcggtgtgcacagacagcagtggaggactgtgagatgatgttgactgaagtg
atgtcattgattgagagaagacgctctgaggtgacacagctgatcagagatcaggagacg
gctgcagtgagtcgagctgaaggactcttggagcgactcaagcaggagattgatgatctg
aggaggagagacgctgagctggacaagatttcacacacagatgatcacatcactttccta
cagagttttcagtctctctctgcacctcctgaatctccagacgacatcagtgtcactttc
ctcttttcttttgatgatgtgagagaatctgtccgtcagctgagagacaaactgcaggat
ttctgcacacagcacatgagaaagatctccgtcacacacaccatcactgagcccaggatc
agagagcacttcctacaatattctcatcagttgactctggatctaaacacagtgaatgaa
ctcctcagtctgtctgagagaaacacaaagatcacaaacactgaaacactccagcagtat
cctgatcatccagacagatttgatgtgcgtcaggtgttgtgtagagagagtgtgtgtgga
cgctgttactgggagattgagaggactggtgttgtgtgtatatcagtgtcatataagagc
atcatcaggaagggatggagtgagtgttggtttggatataatgatcagtcctggagtttg
atctgttatgactctagttacacattcaaacacaataacatcaacactgaactccctgta
aagatcagatgtgatagaataggagtgtatgtggatgagagagcaggaattctgtccttc
tacagcgtctctgacacaatgaccctcatccacagcatcagcaccacattcactcatcct
ctctatcctggattttattttaatatcaattcatcagtgaaactgtgtgatctatag
DBGET
integrated database retrieval system