Triplophysa dalaica: 130418787
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Entry
130418787 CDS
T09616
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130418787 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130418787 (trim32)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130418787 (trim32)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130418787 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
zf-RING_4
Baculo_IE-1
zf-RING_11
DUF2203
Motif
Other DBs
NCBI-GeneID:
130418787
NCBI-ProteinID:
XP_056600856
EnsemblRapid:
ENSTDLG00000026364
LinkDB
All DBs
Position
4:complement(1111793..1115661)
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AA seq
659 aa
AA seq
DB search
MASLTSLDPELVREVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTINGVRCP
FCSKVSRMSSISQLADNLTVLKIIDCASSCGSNMGLMCKSCKNRLPRQYCCDCGVVLCDI
CKSESHQRQGHVVQAIRVAAEQRRKDLGGKLTDLREAMGNIQKKKSAIDNVAKSLRLKYK
AVQQEYAKAELRLQEELSRSRRSFTASMAEIEKLNAQILEEQTYLLSIAEVQVVSRCDYL
TMRIKQTDIALLEEESNNDEEDLDLKTNLPIVLKLQHPELLKTEHSKPLDVGQLTTKPST
VNAEEEDILELAAAAPLDIYRDIDMEMAVEEAVCASPVNFKSKSVDSGEPSPGATGGQVC
QFVKKMGCKGNLPGMFNLPVSICVTSQGEVLVADRGNYRIQIFNRKGFQREIRRNPSSID
NFVLSFLGADLPNLIPLSIAITDQGLIGVTDNYDNSVKVYTADGHCVACHKNQLIKPWGI
AAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFVTCDSSGTVYFTQGLGL
NIENRHNEHHLEGGFSIGSVGMDGQLGKQLSHFFSEAEDFRCITGMCVDSNGDLLVTDSG
RKEILQFPKEGGHNVLIQEGLTCPVGVAVTQKGQLLVLDCWDHCVKVYTYLQRRRSSTC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactgacgtctctggatccagagctggttcgggaggtgttggaatgtcccatc
tgcctggagacctacaaccaggaccagctccggcccaaactgcttcagtgtggtcactcc
gtgtgtcgccagtgccttgagaaactgctcgccagcacaatcaacggcgtgcgctgtccc
ttctgcagtaaagtctcccgcatgagcagcatttcccagctggccgacaatctcaccgtg
ctgaagatcatcgactgcgccagttcatgcggatccaacatgggtctcatgtgcaaatcc
tgtaagaaccgtctgccccgtcagtactgttgtgactgtggcgtcgtgttgtgcgacatc
tgcaagagcgagagtcaccagcggcaaggtcacgtcgtgcaggccattcgcgtggccgcc
gaacagcgtcggaaggacctcggcgggaagctcactgacttgcgggaggcaatgggcaac
attcaaaaaaagaaatccgccatcgacaacgtcgcaaaatcgctccgactgaagtacaag
gcggtccagcaggagtacgccaaggctgaactgcggctccaggaagaactgagccgctcc
cgccggtccttcactgcttccatggccgaaatagagaagctcaacgcacagattctggag
gagcagacgtacctgctcagtatcgctgaggttcaggtggtgtcccgttgcgactatctc
accatgagaatcaagcagaccgatatcgctctgttagaggaggaaagcaataatgacgaa
gaggaccttgacttaaaaaccaatctgcccatcgttctgaaactacagcaccctgaactg
cttaaaaccgagcactcaaaacctttagacgtgggacagctgactacaaaaccctcaacc
gtgaacgcagaagaggaagacatactggagttagccgctgccgctcctcttgacatttat
cgggatattgatatggaaatggcggtggaagaggcggtctgtgcttcacccgttaatttc
aagtccaagtccgtcgacagcggggaaccatctccaggggctaccggcggccaggtctgt
cagttcgtgaaaaagatgggctgcaaggggaatctgcccggcatgttcaaccttccggtc
agcatctgcgtcacgtcacagggagaggtgctcgtggccgaccgggggaactaccgcatc
cagatcttcaaccgcaagggcttccaacgggagatccgccgcaaccccagcagcatcgac
aacttcgtcctgagcttccttggggccgacctgcccaacctcatccccctctccattgcc
atcaccgatcagggcctcatcggtgtcaccgacaactacgacaactccgtgaaggtttac
actgcagatggccactgtgtcgcctgccacaagaaccagctcatcaagccctgggggatc
gccgccatgccctcgggtcagtttgtggtgtcggatgtggagggtggcaagctctggtgc
ctggcggtggatcgcaacgtaggggtggtgaactacaaccgtctgtgctcggcggtccgg
cccaaatttgtgacatgcgactcctccggaacggtctacttcacgcagggtttgggcttg
aacattgagaacagacacaacgagcatcacctggaggggggcttctccatcggctcggtg
ggcatggacggccagttgggaaaacagctcagccacttcttctctgaggccgaggacttc
cgatgcatcacgggcatgtgcgtggactccaacggcgacttgctcgtgacggacagcggc
cgcaaggagatcctccagttccccaaagaaggcggccataacgttctcattcaggagggt
ctaacctgccctgtaggggtcgcggttactcagaaggggcaactactggttttggattgc
tgggaccactgcgtgaaggtttacacgtacttgcagaggagacgttcatctacctgctag
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