Triplophysa dalaica: 130419642
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Entry
130419642 CDS
T09616
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tdw
Triplophysa dalaica
Pathway
tdw03022
Basal transcription factors
tdw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130419642 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
130419642 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130419642 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130419642 (gtf2h2)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130419642 (gtf2h2)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130419642 (gtf2h2)
BRITE hierarchy
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Matrix
Motif
Other DBs
NCBI-GeneID:
130419642
NCBI-ProteinID:
XP_056602502
EnsemblRapid:
ENSTDLG00000022690
LinkDB
All DBs
Position
4:17458309..17462631
Genome browser
AA seq
393 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEVLKEDESGSLKATVDDILFQAKRKRVFESHGQVRLGMMRH
LFVVVDTSRTMEDQDLKPNRLTSTLKLMEYFVEEYFDQNPISQIGIITTKNKRAERLTDL
AGNPKKHIAALKKAVDSTCIGEPSLYNSLHMAMQTLKHMPAHTSKEILIVFSSLTTCDPA
NIYELIKTIKDLKIRVSVIGLSAEVRVCTILTRETGGSYNVILDEGHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHVIASMSDQDAKPSFSMSHLESTSGGPELTLGGYYCPQCRGKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLDAFQETLLEEYEGEKFCEACQGELKDKRIFT
CPSCKKVFCVECDLFVHDTLHCCPGCMHTDGTS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagccagagagaacaaaacgctgggaagggggatacgaacgaacatgggag
gttctgaaggaggatgagtctggatctctgaaagctacagtagatgacattcttttccag
gcaaagaggaaaagagtgtttgaaagtcatggacaagttcgacttgggatgatgcgccac
ctttttgtggttgttgacacatctagaacaatggaagatcaagacttaaagccaaacagg
ctgacctccaccttgaagctgatggagtattttgtagaagaatactttgaccagaaccca
ataagtcagataggaatcattactaccaagaacaagagggcagagagactgacagatctt
gcagggaatcctaagaagcatatagcagcacttaagaaagctgtggactcaacatgcata
ggagaaccatctctttataactctctccacatggcaatgcagactctgaaacacatgcct
gctcatacaagcaaagagattctgatcgttttcagcagtttgaccacttgtgacccagcc
aacatctatgaacttatcaaaaccattaaagatttgaaaatcagagtgtctgtgatcgga
ctgtcggcagaggttcgagtgtgcaccattctcacaagagaaacaggaggaagctacaat
gtgatattggatgaaggtcatttcaaagagctattgatgttgcatgtgaaaccacctcct
gccagctcctcctccgagtgctccctcattcgcatgggattcccccagcacgtcatagcc
tccatgtcagatcaggatgccaaaccctctttcagtatgtcgcaccttgaaagcacatct
ggagggccagaactcactctcggaggatattactgtccacagtgcagaggcaaatatact
gagcttccggtggaatgcaaagtgtgcggtctaacattggtttctgctcctcacctggcc
cgttccttccaccatctcttccctctggatgcctttcaggagaccctgcttgaggaatac
gaaggagagaagttctgtgaggcttgccaaggagagttgaaagacaaaagaatatttact
tgtccgtcgtgtaagaaagtgttctgcgtagagtgtgatctctttgtacatgacacactt
cactgctgtcccggctgcatgcacaccgatgggacatcctga
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