Triplophysa dalaica: 130420355
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Entry
130420355 CDS
T09616
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130420355
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130420355
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
130420355
NCBI-ProteinID:
XP_056603566
EnsemblRapid:
ENSTDLG00000001044
LinkDB
All DBs
Position
5:14480713..14498270
Genome browser
AA seq
561 aa
AA seq
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MAEASILWSEEQFSCSVCLDLLKDPVTVPCGHSYCMSCITGCWDQDDQKRVYSCPQCRKT
ITPRTALGKNTILAEMVEKLSNTKEQAAVPACYTGPGDVDCXVCIGRKRKSVKTCLMCLE
SYCQTHFNHHEGFHSGKRHKITDATGQLQEIICRQHGKIMDIYCNTDQQQICYLCMVDEH
KNHETVISAAERSEKQIQLKAIQGKYQQRIQKMQTEFQRVRAVVETYKRSAQIAVEDNER
IFTEMISNFEKMCSEVTQLIRDQEKFAVSRAEEVLKKLEQKIDDLKRRDTELELLSRTDD
HINFLQSFQSLHVPPESSDSPSITVRSVLAFDDLEKPLSHLREKLEHFCKEEIEKISFRV
KYAEIIPSPEPKTREEFLVYSHELTLDPNTLNERLRLSEGNRVLTNTGILQEYPDHPDRF
TYWYQGLCRDSVCGRSYWEVEWSGDIAITVSYKSIRREGRGDECEFGRNDKSWSLDCTDS
RYSFWHNNKHTDLPVVSRSSRIGVYVDYSAGTLSLYSVSDTMTLIYSIHTTFTHLLYPGF
RLNYWRRGRVESKVKLCELTM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagtattttatggtctgaggaacagttcagttgttcagtgtgtttggat
ctactgaaggatccagtcactgttccgtgtggacacagttactgtatgagctgtatcaca
ggctgctgggatcaggatgatcagaagagagtctacagctgccctcagtgcagaaagacc
atcactccaagaactgctttaggtaaaaacaccattctagctgaaatggtggagaaacta
agtaatactaaggaacaagctgctgttcctgcatgttatactggacctggagatgtggat
tgtngcgtctgtattggaagaaagcgtaaatctgtcaagacctgtctgatgtgtctggaa
tcgtactgtcaaactcatttcaaccaccatgagggatttcattcaggcaagcgacacaaa
ataactgatgccactggacaactacaagagataatctgccgtcaacatggcaaaattatg
gatatatactgtaatactgatcagcagcaaatatgttatttgtgtatggtggatgagcac
aaaaaccatgaaactgtaatatctgcagcagaacgaagtgagaaacagatccagttgaag
gcgatccaaggaaaataccagcagagaatccaaaagatgcagacagagtttcagagggta
agagcagttgtggaaacatacaagcgctctgctcagatagcagtggaggacaatgagagg
atctttactgaaatgatctcaaactttgagaaaatgtgctctgaggtgacacagttgatc
agagatcaggaaaaatttgcagtgagtcgagctgaagaagtcttgaagaaactggagcag
aagattgatgatctcaagaggagagacactgagctggagctgctttcaagaacggatgat
cacataaacttcctgcagagtttccagtctctccatgttccacctgaatcttcagactca
cccagcatcactgtcaggtctgttttagcttttgatgatttagaaaaacctttatctcat
ctgagagagaaactggagcatttctgcaaagaagaaattgaaaaaatatcctttagagtg
aaatatgctgagattattcccagccctgaacccaagacaagggaggagtttcttgtgtat
tctcatgagctgacactggatccaaacacactgaatgaacggctccgtctgtctgagggg
aacagagtgttaactaatactggcatattacaggagtatccagatcatccagacagattt
acttattggtatcaggggttgtgcagagatagtgtgtgtggacgctcttactgggaggtt
gagtggagtggtgatatagctataacagtgtcatataagagcatcagaagagagggacgg
ggtgatgagtgtgagtttggacgtaatgataaatcctggagtttggactgcacagactcc
agatactcattctggcacaacaacaaacacactgatcttcctgtagtatccagatcttct
agaataggagtgtatgttgattacagtgcaggaactctttccctttacagcgtctctgac
acaatgaccctcatctacagcatccacaccactttcactcatcttctctatcctgggttt
agactaaattactggcgtaggggccgggttgaatcaaaagtaaaactctgtgaactaact
atgtaa
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