Triplophysa dalaica: 130425266
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Entry
130425266 CDS
T09616
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130425266 (chd6)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130425266 (chd6)
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
CHDCT2
MUN
Motif
Other DBs
NCBI-GeneID:
130425266
NCBI-ProteinID:
XP_056607453
EnsemblRapid:
ENSTDLG00000002441
LinkDB
All DBs
Position
6:22331128..22364411
Genome browser
AA seq
2960 aa
AA seq
DB search
MSGAGVSSSNSCIGRLTPVSSQRMGRRHKVQEKMKIQKKDKQMSAAHVLKHTPSAAASHA
SDQNAQTTFPIGHFGKEQLRIIGGPPNHCMAQPKHSGLRQVGPVDTDQSLRPTPSPINSE
EDDGGGGSRVKKKRRKKEKKVLEWPQDGHGDVKPKRKEQKEGKELLPRKSKAAKEQKNHK
KREVKVQKEVRKGKKGQDAKVKPQAKNAATHPPSKRGRKPKEQGVMPPEKKKKGKRKSDA
LLEVVESDDTASLSTLATGGEESIDPMDTKRRSGRQVKRRKYNEDLDFKVVDDDGETIAV
LGTGRIPALSSTLAWQAEEPPEDEANIIEKILAVRTVNKEMSPDEAPESLEKFYVKYRNF
SYLHCKWATLEELEKDPRIHQKIKRYRNKQAQMKHIFTEPDEDIFNPDYIEVDRVLEIAI
TTDTETGEEVTHYLVKWCSLPYEESTWELQEDVDPVKIKEFEDLKKIPEIKHVERPLPEQ
WQKLERSRDYINGNELREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLYEMFF
MGLRGPFLIIAPLSTITNWEREFRTWTMMNVIVYHGSQISRQMIHQYEMYHRDDQGNLVT
GQFKFHGIITTFEMIMADCPELKKINWRCVVIDEAHRLKNRNCKLLEGLKLMNLEHKVLL
TGTPLQNSVEELFSLLNFLEPLQFPSESTFLEEFGDLKTEEQVKKLQAILKPMMLRRLKD
DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLAKGANQHNMPNLINTMMELRKCC
NHPYLITGAEEKILESFRKTYSPDALDFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVF
SQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFSKVDSDRFVFLLCTRAGGLG
INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKL
GLDKAVLQDINRKGSLNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQR
RTRTIKIESEGKGSTFAKASFVSSGNRTDISLDDPNFWQKWAKIAELEIDSKAEKESLVI
DTPRVRKQTRHYNSFEDDELMEFSELDSDSEERPCRSRRLSDRSRRYLRAECFRVEKNLL
IFGWGRWNEILNHGRFKWHLTERDMEILCRALLVYCVRHYKGDDKIKSFIWDLITPTKDG
HNQALQNHSGLSAPVPRGRKGKKLKNQLSPPELKNADWLVHCNPEVVLQDDSYKKHLKQH
CNKVLLRVRMLYYLKVEVLGEAAAQALEGIPSSKLEVTLPDIDYIEIPTIWWDAEADKSL
LVGVHKHGYERYNAMRADPALCFLERVGMPDVTALTVEQGGAEVVADTPDSISKNDELKE
ETDSKSEELEEKGDIKEEPMLEEIGKNDSTVMASLQGDLIAEMIEQGRIQWPAGSSLTAR
LRRLITAYQRYTRREPLRPDFLLHEGIAPVAWHIGDFRHCTTEPDPLFLEWQRRWTRREQ
ADFYRTVSSFGVVFDPEKKTFDWNQFRALARLERKTDESLERYFYSFVSMCRTACRLPPR
KDECSVDPTLFVEPITEERAARTLYRIELLRKVREQVLRHPLLGARLQLCRPSLYLPVWW
ECGKHDRDLLIGVAKHGLSRTDFYILNDPQLSFLEAHRNYVHKENHRYPAPGLSHLHCCL
YDVNHGHCQSPQPPEYHAATSHHTQTHQLIHTPAHHQPTEVVASETGSINMGPGTREVFL
DCPPLDDSLELGSLQHDSLTSDQLHSKSGKEAFNGFPFNSATGGQNMLNSYGVQGELNGA
QGDIADTIAGKLRSDVLVGEQGSSEETGLMPPSVELDELQTPWESSDHAETSDMFNETDP
ILGAPALETGFLDAAQPEDGREGDEVLTDCLSMPSSDSQSNPVEPLAPSFMLFKELNVGE
TSVDQTDLSASLPEYVPPTPLGLPEVSLDQADPLSEEQEEKLSDSNMTQSIPSPGDGAES
VGFHFEKEELSLDSDSLATAVPRMKDADEIDKMPSIESSQKMDCKVSFEDSCEAPLEESY
VKAITEPGKVPLQESYDLTCDETLQEPCEGYQQDSMEGHLLEEPCKESPTEECNLTNSTL
STDYPLASSLPSSPAILPDTSVSPGLESDPNIKQEFLMDPVVSDVKPEPDSTTQLAQTEV
LEVKDKLKDEDTKTPALLDVEAPRFSLPMCEMVNSVHEIREPTIAQLLQEKALFSFSEWP
KDRVIINRIDSVCHTILKGKWPSSSQQYESPSSLANTCIPSSTHQRGGFLPTRMSQSLNF
NLPHTVQHLPKERLVAPAFLSELKRPRHGFEFEAEVLAKPSNLAEKMQIGSQRANALLLN
GWQDAAIDLSKQPELTVGGESGPIGHMSHTVQSAPHKISGIGSIQGSLGLDMAGILQAGL
IHPVTGQIVNGSLRRDDAMFRRRRGRRRNVEPTDLNFLKSRVVNLAEQQSGTENISHPVV
SSTSSQSECPSASPATIPAPPSAPPSTAPPAEALNVTVEREAANKGLMEWLRQNPSYNME
LPTFPSSQSASMLHSFLDRPKQRRHRCKDPTKLDINSLTGEERVPVVHRSTGRRLGGAMA
PAIKELSRWLDANSEYCVAPDWADVVKHSGFLPEGKFTRILSGPVCREPGPRRRGRRPRC
EMPKAPELPAGMAPLFMNGGLIGSMDLVSLTNLRNVPGIPLTGIMGFPHGFATTVASGDD
GKNGLGMLPMMLHGMTAVQPPMYSAHVGGMMTQPLSTATSTVSTATASSASASGTSTNST
TVTSTSSSADSSDTTAQTDKAGSPMSTEKRNKEETKQGGEERKITPGTVSTGAATSSSSS
ITSSGSHLTFNPFLIPGMSHSLLYPHMFLPPGSIMALPAMPAADSTGSPKRKRKRVVEVS
GNVVVQVDGLEVKGLKVEQTTERKNQECEMEDDRPDVDLAQVNDPSDPKNDPSEEKSTKK
EMAEKGEIAGEACGSRDGED
NT seq
8883 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagccggtgtgtccagttcaaatagttgcataggtagactgacacctgtctcg
tctcagagaatgggacgcagacacaaagttcaagaaaaaatgaaaatacaaaaaaaggac
aagcagatgtctgcagcccacgtattaaagcacactccatccgctgccgcctcgcacgcc
tctgaccaaaacgcacaaactacatttcccatcggccactttggcaaagaacagttacga
atcatcggcgggccccccaatcactgcatggctcagccaaagcactctgggttaaggcag
gtggggcccgtggacaccgaccagagtctccgcccgacgccctcgccaatcaacagcgag
gaggacgatggagggggcgggtccagagtgaagaagaaacgtaggaaaaaagaaaagaaa
gtgctggagtggccgcaagatggacatggcgacgttaaaccaaagagaaaggagcaaaaa
gaagggaaggagcttcttccaagaaagtcgaaggcggcaaaggagcaaaagaatcacaag
aagagggaggtgaaagttcaaaaggaggtcagaaagggcaagaaagggcaagatgcgaaa
gtgaaaccgcaggctaagaacgctgcaacacatccaccctcaaaaagagggaggaagcca
aaagagcagggtgtcatgccaccagagaagaagaagaagggcaagaggaaaagtgatgct
ctgctggaggtggtggagagcgacgacacagcctccctcagcacgctggccactggaggc
gaggaaagcattgaccctatggacactaagaggcgttcagggcgtcaggtgaagcgtcgg
aagtataatgaagatcttgatttcaaggtcgtggatgatgatggggagaccatcgctgtt
ttgggcacgggccgaattcctgccctgtcttctacccttgcctggcaggctgaggaaccc
cctgaagatgaagccaacatcattgaaaagatactcgcagtacgaacagtcaacaaagag
atgtctccagatgaagcacccgaaagcttggaaaaattttatgtgaagtacagaaatttc
tcctatctgcactgtaaatgggcgaccttggaagagttggagaaggacccacgcattcac
caaaaaatcaagcgttatagaaacaagcaggcacaaatgaagcacattttcacagagccg
gatgaagacatctttaatccggactacatcgaggttgatcgagttttagagatcgctatc
actacagacacagaaacaggagaggaagttacacactacctagtgaaatggtgctctctg
ccatatgaggagagcacttgggagctacaggaagatgttgatcccgtgaaaatcaaagag
tttgaagacctcaagaaaataccagaaatcaaacatgtggaaagacctctaccagaacaa
tggcagaaactggagagatctcgagactacataaatgggaacgagcttagagaatatcag
ttagagggaatgaactggctgctcttcaactggtacaacaggaaaaactgtatcctggct
gacgaaatgggcctggggaagaccatccagtccatcacgttcctatatgagatgttcttc
atgggtttgagaggaccattcctcatcatcgcccctctatctaccatcaccaactgggag
agagagtttcgtacatggacaatgatgaacgtcattgtttatcacggcagtcagatcagc
cgccagatgatccatcagtacgagatgtaccatcgagacgatcagggaaatctagtaacc
gggcagtttaagtttcatgggataatcactacattcgaaatgatcatggcagactgtcca
gagctgaagaagattaactggcgctgtgtggtgatcgacgaggctcatcgacttaaaaac
cgcaactgtaaactgctggagggtctcaagctcatgaacctggaacataaagttcttctc
acaggaactcctttgcagaactcagttgaggaacttttcagtctcctcaacttcctcgaa
cccttacagttcccgtctgagtccactttcctggaggagtttggagacctgaaaactgag
gagcaggtaaagaaacttcaggccattctgaagcccatgatgttgaggagactaaaggac
gatgtcgagaagaatctcgcccccaaagaggagacgatcatcgaggtcgagctcacgaac
attcagaagaaatactacagggccattctggagaaaaacttcacctttcttgccaaggga
gcaaaccagcacaacatgcccaacctcattaacacaatgatggagcttcgcaagtgctgt
aatcacccgtaccttatcacaggtgccgaggagaagatactcgagagtttcaggaagacg
tacagtcccgacgccttggatttccagcttcaggctatgatccaggctgctggtaaacta
gtgctcatagacaagctgctgcccaaacttctagctggaggacataaagtgctggtgttt
tcacagatggtcagatgtctggatatactggaagactacctcatccagaggaggtacacg
tacgagcgaatcgatggaagggttcgagggaatctacggcaggccgccatcgatcgcttc
agtaaggtggactcggaccgtttcgtgttcctcctctgcacacgagcgggagggctgggc
atcaacctcaccgccgctgacacctgcatcatattcgactcggactggaacccgcagaac
gacttgcaggctcaagctcgttgccaccggatcggtcaaagcaaagcagtgaaggtgtat
cgccttatcacgcggaactcatatgagagggaaatgttcgacaaagccagtctcaaactg
ggattggacaaggctgttctacaggacataaaccgcaagggaagtctcaacggggttcaa
caactttcaaagatggaggtggaagatctcctcaggaagggagcatacggagcgctcatg
gatgaagaagacgagggctcgaaattttgtgaggaggacatcgatcaaatcctgcaaaga
cgcacacggaccataaaaatcgagtctgaggggaagggatccacgtttgccaaggccagc
tttgtttcttcagggaaccgtacggacatctctctggacgatccaaacttctggcagaaa
tgggctaaaatcgctgagctggaaatcgactccaaagctgaaaaggagagtttggtgatc
gacacgcctcgcgtacggaagcagacacgtcactataattcgttcgaggatgacgagctg
atggaattctctgaactcgacagcgactctgaagaacgcccctgtcgttcgagacgacta
agtgaccgcagcagacgatacctccgagcagagtgcttcagagtggagaagaacctgctc
atttttgggtggggtagatggaatgaaattctcaatcatggccgatttaaatggcatcta
acggagagagacatggagatcctgtgcagggctctgctggtctactgtgttcgacattat
aaaggagacgataaaatcaagagcttcatctgggacctgatcacgcccactaaagacgga
cacaaccaagcactccaaaaccactcgggcctgtcagctcctgtcccacggggccgtaaa
ggcaagaagctaaaaaaccaattgagtccacctgagctgaagaatgcagactggctggtc
cactgtaaccctgaggtggttcttcaggacgacagctacaagaagcacctcaagcaacat
tgcaacaaagttttgctgagggtgcgaatgctatactatctgaaggtggaagttctgggg
gaagctgcggctcaagctctggaaggaatcccatctagtaaactggaggtcactctgcct
gatatcgactacattgagatccctaccatatggtgggacgctgaggctgataaatcactg
ctcgttggggtacacaaacatgggtacgagcggtataatgccatgcgtgcggaccctgcg
ctgtgtttcctggagcgggtgggcatgcctgacgtcacggcattgacagtagaacaaggt
ggagcagaagtagttgcagatactcctgatagtatcagcaagaatgatgaactgaaggag
gagacagattctaagtctgaggagttagaagagaagggagacatcaaggaggagcccatg
ttagaggagatcgggaaaaatgacagcacggtgatggcatcacttcaaggagacctcatt
gcagaaatgattgagcagggacggatacagtggccggcaggctcgtctcttacagcgaga
ttacgacggctcattactgcctatcaacgatacacacggcgtgagccacttcgtcctgat
ttcctcctgcacgagggaattgcacctgtggcctggcatattggagattttaggcactgc
acaactgagccagatccactttttctggaatggcaacggaggtggacacgtcgtgagcag
gcggacttctatcgcaccgtgtcatcgtttggggtagtttttgaccctgaaaagaagact
tttgactggaaccagttccgtgcccttgctcgtttggagaggaaaacggatgaaagtttg
gagagatatttctacagctttgtctcgatgtgtcgcactgcttgtagacttccacccaga
aaagatgaatgttctgttgaccctacgctctttgtggaacccattacagaggagcgagct
gcacgaacattataccgtatcgaacttttgaggaaggtccgtgagcaagtattacgccac
ccgcttttgggggcacgactgcagctttgtcgtcctagcctttatttgcccgtttggtgg
gagtgtgggaaacacgatcgtgatcttctcattggtgttgctaagcacggcttgagccga
acagacttttacatcttaaatgaccctcagctatcctttctggaggcccaccgaaactac
gttcacaaagaaaaccacagatatcctgcgccgggtttgtctcatctccattgctgctta
tacgatgtcaaccatggccattgtcagtccccacaacctccggagtaccacgccgcaacc
tcacaccacacacaaacccatcaactcattcatactcccgcccatcaccagcccacagaa
gtggtggcgtcagagactggaagcatcaacatgggtccgggaacaagggaagtatttttg
gactgtcctccgttggatgactcgctagagttggggtctttacaacatgacagcttgaca
tcagatcagctacatagtaagtccggtaaagaggcctttaatggattccccttcaattct
gcaactggtgggcagaatatgctaaactcatacggtgttcaaggagaactaaatggcgct
caaggagatatagcggacaccatagctgggaagcttcgtagcgacgttttggtcggtgag
caagggtcctcagaggagaccggcttaatgcctccttctgtggaactggatgaacttcag
actccatgggaaagctcggaccacgccgaaacctccgacatgttcaacgagaccgatccc
attctgggagcaccagcattagaaacaggatttctggatgccgctcagccagaagacggt
cgggaaggtgatgaagttctcactgactgtttgagcatgcctagttcagactcccagagt
aaccctgtagagccactagcaccaagcttcatgttgtttaaagagcttaatgtaggagag
acttctgtggatcagacggatctgtctgcaagtcttccagaatacgtaccgccgacacct
ctcggactcccagaggttagtctcgaccaggccgaccccttaagtgaggagcaagaggag
aagcttagtgattccaacatgacacagagcattcccagtcctggagatggagcggaaagc
gtagggttccattttgagaaagaagaactttccctggatagtgacagtctggcgacagcc
gttccgaggatgaaggacgccgatgaaatcgacaagatgccttcaatagagtcatcacaa
aaaatggactgcaaggtttcctttgaggattcttgtgaagcgcccttggaagagtcgtat
gtaaaggcgataacagagccgggaaaagtacctttgcaggagtcgtacgatctgacctgt
gacgagaccctgcaggaaccttgtgaagggtatcagcaagactcaatggagggacatttg
cttgaagaaccctgtaaagaatcgccaacagaggaatgcaatcttacaaacagtactctc
tcaacggattacccattggcctcttcactcccgtcatctccagctatcttacctgacacc
tcggtatctcctggccttgagtcggatcccaacatcaaacaagagttcctcatggatcca
gtggtgtcagatgtaaaacctgagccggacagcactacacagcttgctcagactgaagtt
ctggaggtgaaggataaactgaaggatgaagatacaaagacaccagcattattagatgtc
gaagccccacgtttttcattacccatgtgtgagatggtcaacagcgtccatgaaataagg
gaaccaaccattgctcagcttctacaggagaaagccctcttctccttttctgagtggccg
aaggacagagttatcatcaaccgtattgacagtgtctgccacactatattaaagggaaag
tggccttcctccagtcagcagtatgagtctcccagctcacttgctaacacttgcatcccc
agcagtacccatcagaggggaggattcctgcccaccagaatgtctcagagcctaaacttt
aatcttcctcacactgttcaacatttacccaaggagcgattggtggctcctgctttcctc
tccgaactgaaacgtcccagacacggattcgaattcgaggcagaggttctcgccaaaccg
agcaatcttgcagaaaagatgcagattggatctcaacgtgctaacgctcttctccttaac
ggctggcaggatgcagccattgacctctccaagcagccagagctaacggttggtggagaa
agtgggccgatcggtcacatgagccacactgtccaatcagcacctcataaaatatctggg
ataggctccatacaaggctcgctgggattggatatggcgggcattttgcaggctggcctg
attcacccggttacagggcagatcgtcaacggcagccttcgccgcgatgacgccatgttt
aggaggaggagaggacggagaagaaacgtggagcccactgacttgaacttcttgaagagc
cgagtcgtgaacttagcagaacaacagagcggaacagagaatatcagccatcctgttgtg
tcgtctacatcctcccagtcagaatgtccctcagcctctcctgctacaattcctgcccca
ccatcagcacccccctcaactgctcctccagcagaggccctgaacgtcaccgtggaaagg
gaagccgccaacaaaggcctcatggaatggctcagacagaatcccagctacaacatggag
cttcccactttcccatcgtcacagagcgcaagcatgctgcatagcttcttggatcgtcca
aagcagagaaggcatcgctgcaaagacccaaccaaactagatatcaactccctaaccgga
gaggagagggtccctgtggtgcacagaagcacaggccgcaggcttgggggtgctatggct
ccagccataaaggagctttctagatggctggatgcaaactctgagtattgtgtggcacct
gattgggcggatgtggtaaagcactctggctttctccctgaaggaaaattcactcgcatc
ctctctgggcccgtatgccgggaaccaggtccacgaagaagaggcaggcgtcctcgctgc
gagatgcccaaagctccagagctccctgctggaatggctccgctcttcatgaacggtggt
ctcattggaagcatggacctggttagcttaaccaatctacgcaatgtcccgggcatccca
ttaacggggatcatgggctttcctcacggttttgctaccactgtagcgtcaggagacgat
ggcaagaatggtctcggcatgctacccatgatgctccatggcatgactgccgtgcaaccg
cccatgtatagcgcacacgtgggtgggatgatgacacagccgctgtccacggcaacctca
acggtttccacagctaccgcatcatctgcctctgcaagcgggacttctacgaactccacc
acagttacctcaacctccagctcagcggatagttcggacaccacggcgcagacggacaaa
gcaggctctccgatgagcacggagaaaaggaataaggaggagaccaagcaaggcggggaa
gagaggaaaataacgcccggtacggtctctacaggtgcagccaccagcagttctagtagt
atcacaagcagcggcagccatttgacctttaaccccttccttatcccgggaatgtcccat
agcttgctctatccgcacatgttcttgccacccggcagtataatggcgctgcccgctatg
cccgccgcagacagcacgggcagccccaagagaaagaggaagagagtggttgaagtaagt
gggaatgttgtcgttcaggtcgatggcttggaagtcaaggggcttaaagtcgagcagaca
acagaacgaaagaatcaagagtgcgagatggaagacgataggcctgatgtagatttagct
caggtcaatgatccttctgaccctaaaaatgatccttctgaggagaaaagtactaaaaaa
gagatggcggaaaagggagagatcgctggggaggcctgcggttcacgtgacggtgaagac
tag
DBGET
integrated database retrieval system
