Triplophysa dalaica: 130427841
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Entry
130427841 CDS
T09616
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like
KO
K12006
tripartite motif-containing protein 16
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130427841
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130427841
BRITE hierarchy
Motif
Pfam:
Ran_BP1
Pro_isomerase
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-RING_2
DUF2383
BAG
Motif
Other DBs
NCBI-GeneID:
130427841
NCBI-ProteinID:
XP_056611524
EnsemblRapid:
ENSTDLG00000005106
LinkDB
All DBs
Position
8:2310222..2316834
Genome browser
AA seq
691 aa
AA seq
DB search
MAEDSFSTKQFSCQVCLDLLKDPVTVPCGHSYCITCITDCWNEDELKGIYSCPECKQTFT
PRPAVNRNSMLTIVVEKLKKKTHQADVSAQCYADPQDVECDVCIGRKYKAVKSCLMCLNS
FCKNHLEQHENLFKGKRHKLMDATERFHKVICLKHNKELEIYCRTDQQCICYLCTMDNHK
THDTVAAVAERTEKQETQKKFQRRIQQREKDVQELKENLKSHKVSAQTALEDCERMFTEL
ILSIDRCRSEVIQLIRDQEKAAVSRAEGVLEHLELEIDDLKGRDAELELLLQADDHIHFL
QSFQCFSHEPSDSPNITVRSFHLFDDVRMTVGHLKDKLQDICTEAIEEICKRDSIFTRTN
VFESRGGILNKAKESIEEKVSLPKLLHLEVKSGEEDEEVLFKGRTKLYWFDHDLSQWKER
GVGDIKILFHREKKSYRVLMRRYLVLTVCANHIITKTIELKPMNTCASALVWTATDYADG
DAKVEQFAAKFRTQDQSKSFAQTFTDCQSRMSQADFSQMSIAEGHSRETNPVVYFSIAVD
DEPFGRITMELFSHIVPKTSENFRALCTGEKGFGFHNSVFHRTVPDFMCQGGDITNRDGT
GGKSIYGVEFEDENFVVKHTGPGLLSMANRGRDTNTSQFFVTLSKAERLDFKHVAFGFVK
DGIDVLKKIGDLGTKTGKPTKKIIIIDCGQL
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacagtttctcaacaaagcagttcagctgtcaagtgtgtctggatctactg
aaggatccagtgaccgttccctgtggacacagttactgtataacttgtattacagactgc
tggaatgaagatgaactgaaaggaatctacagctgcccagagtgcaaacagaccttcact
ccgagacctgccgtgaatagaaactccatgctgactatagtggtggagaaactgaagaag
aaaacacaccaagctgatgtttccgctcagtgttacgctgatcctcaggatgtggagtgt
gatgtctgtattggcagaaaatacaaggctgtcaagtcctgtttgatgtgtctgaactcc
ttctgtaaaaatcaccttgaacaacatgagaatctctttaaaggaaagagacacaagctg
atggatgccactgagagattccacaaggtgatctgccttaaacataataaagagctggaa
atctactgccgtactgaccagcaatgcatttgttacctgtgtacgatggacaatcacaaa
acccacgatactgttgcagctgtagctgagaggacagaaaaacaggagacacagaaaaag
ttccagcggagaatccaacaaagagaaaaagatgttcaggagttgaaagagaatctgaag
tctcataaagtctctgcacagacggcactggaggattgtgagaggatgtttacagaacta
atcttatccattgacagatgccgctctgaggtgatacagctgatcagagatcaggagaag
gctgcagtgagtcgtgctgaaggagtcttggagcatctggagctggagattgatgatcta
aaggggagagatgctgagctggagctgcttttacaggcggatgatcatattcattttctt
cagagtttccagtgtttctctcatgaaccttcagactcaccaaacattactgtccgttct
tttcacttgtttgatgatgtgagaatgactgtcggtcacctcaaagataaactgcaggat
atctgtacagaggcgattgaagagatatgcaaaagagattctatttttactcggacaaat
gtgtttgaaagtagagggggaatactcaataaagcaaaggagagtattgaggaaaaagtg
tccttgccaaagctcctccacctggaggtgaagtctggggaagaggacgaggaggtcctg
tttaaagggaggaccaaactctactggtttgaccatgatctcagccagtggaaggagcgt
ggagtgggagacatcaaaatcctcttccaccgagaaaagaagtcctaccgtgtactcatg
agaagatatctggttctcacagtgtgtgccaatcacatcattaccaaaaccattgagctg
aaacccatgaacacctgcgccagtgcactggtgtggacggctactgactatgcagatgga
gatgctaaagtagaacaatttgcagcgaagtttagaactcaagatcagtccaaatccttc
gcacaaactttcacagactgccagagtcgaatgtcgcaggcagacttctcacagatgtcc
atagctgagggacattcaagagagaccaaccctgtggtgtactttagcatcgctgtagat
gatgagccattcggacggatcacaatggagcttttctctcatattgttccaaaaacatcc
gaaaacttcagagctctgtgcactggagaaaagggctttggattccacaactcggttttc
cacaggactgttcctgactttatgtgtcaggggggtgatatcaccaaccgtgatggaacg
ggggggaaatccatctatggtgtggaatttgaagatgagaactttgtcgtgaagcacaca
ggaccagggctgctgtccatggccaatcgtggaagagatacaaacacctctcagttcttc
gttaccctcagtaaagcagagcggttagattttaaacatgttgcctttggctttgtcaaa
gatggcatagatgttttgaaaaagataggagacctgggaactaagacaggaaaacctact
aaaaagatcatcatcatagattgtggacagttgtga
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