Triplophysa dalaica: 130428512
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Entry
130428512 CDS
T09616
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdw03016
]
130428512 (tyw1)
Enzymes [BR:
tdw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
130428512 (tyw1)
Transfer RNA biogenesis [BR:
tdw03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130428512 (tyw1)
BRITE hierarchy
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
130428512
NCBI-ProteinID:
XP_056612593
EnsemblRapid:
ENSTDLG00000002927
LinkDB
All DBs
Position
9:complement(10236791..10284197)
Genome browser
AA seq
757 aa
AA seq
DB search
MFDRPQKMLFLATLWSLSYCAVGSEISGALNDVWGYTEPYLRAVWQNRLCVYTAAAVLIG
LWFTVNVAFRKKETITPVSAHLHSSAKKQELSPDTEKIVHVAGVRIFYGSQTGTAKGFAG
ELAEDVRGQGFECEISDMKEYDPDDRLAEECSSKMICVFMVATYTDGQPTESAEWFCKWL
EEASTDFRYGKTYLKGMRYAVFGLGNSVYVGHYNTVSKNIDKWLWMLSAARIMTRGEGDC
NVVKSRHGSIQADFQAWKAKFLSRLQPLAKGEKKVCSGKCKSDSCKNKKKHKEEAEDSQS
LAQKNSSEEELMESSSDAESSAEEDKSHGSVIDMEDLGNVMNRMKKAKKMEADEENSQRI
KLSKQNGVRNSVAEEDRREMITPALRDSLTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCY
KHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKILQEAVENHRS
MIRQFRGVPGVRPERFDEGLTVKHCALSLVGEPIMYPEINTFLRLLHHQHISSFLVTNAQ
FPEEIRNLVPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFQDSLKALGEKQQRTVYRLT
LVKAWNVDELKAYADLIALGQPDFIEVKGVTYCGESSASSLTMANVPWHEEVIHFVQQLA
NLLPDYEIACEHEHSNCLLLSHHKFKVGGEWWTWIDYERFQELIQEYEESGGTKSFSAID
YMAKTPTWALFGAKERGFEPSDTRFQRKNKTKDISGC
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagaccacagaagatgttgtttttagcgacgttatggagtttgtcatattgt
gccgtcggtagtgagatctcaggtgctttaaatgatgtttggggttacactgagccgtac
ctgcgtgctgtatggcagaacaggttatgtgtgtatactgctgctgctgttctcatagga
ctctggtttactgtgaatgtagccttcagaaagaaagaaacaatcacccctgtaagtgca
catcttcatagctctgcgaagaaacaggagttgtcacctgacacagagaagattgttcac
gttgctggagtccgaatattttatggatcccagactggaactgcgaaggggtttgccgga
gagcttgctgaagatgtcaggggtcaggggttcgagtgtgaaatctcagacatgaaagaa
tatgaccccgacgacagactagcagaggagtgttccagcaagatgatctgtgtgttcatg
gtggccacgtacactgacggacagcccaccgagagcgctgaatggttctgtaaatggctc
gaggaagcatccactgatttccgatatggcaaaacctacctgaagggaatgagatatgcc
gtcttcggcctgggcaactccgtttacgtcggccattataacacggtcagtaaaaacatt
gacaagtggttatggatgctgagcgccgcccggatcatgaccagaggggaaggtgattgc
aacgtggtgaagagtagacacggcagcatccaggccgatttccaagcctggaaagcaaag
ttcctgagccgtctgcagccattggctaagggtgagaagaaagtctgctccgggaaatgc
aaaagcgacagctgcaaaaataagaagaaacataaggaggaggcagaggacagccagtcg
ctcgcccagaagaacagctcagaggaggagttgatggagtccagcagtgatgctgaatcc
tcagctgaagaagataagtctcacggctctgtcattgacatggaggacctcggaaatgtg
atgaaccgcatgaagaaagccaagaagatggaggcggatgaggagaactcccagaggata
aagctgtcaaagcagaatggagtgaggaatagtgtggcagaggaagataggagagagatg
atcactccagctttgagagattctcttactaaacaagggtataaactaataggcagccac
tcaggggtgaaattgtgtcgttggacgaagtcgatgctgagaggcagaggaggctgctat
aaacacaccttctatgggattgaatcgcatcgttgtatggagaccacaccaagcctggcg
tgtgccaacaaatgtgttttctgctggagacatcacaccaacccggtgggcaccgagtgg
cgctggaaaatggacccggccgagaagatccttcaggaggcggtggagaaccacaggagt
atgattcgtcagttcagaggggttccaggcgtgcgtcccgagcgttttgatgaagggctc
accgtaaagcactgtgctctgtctctggtgggtgaacccatcatgtatcctgagatcaac
acctttctccgactcttacaccatcagcatatatccagcttcctggtgaccaatgcccag
tttccagaggagatcaggaatctggtgcccgtgacacagctttacgtcagcgttgatgcc
agtaccaaagacagtctgaagaaaattgaccgtcctctcttcaaagacttctggcagcgc
ttccaggacagtctgaaagctctcggtgaaaagcaacagcggaccgtgtacagactgact
ctggtcaaggcctggaatgtagatgagctcaaagcctacgctgatctcattgccctcggc
cagccagacttcattgaggtcaagggagtgacttattgcggcgagagctcggccagcagc
ctgaccatggccaacgtcccttggcacgaggaggtcatccatttcgtgcagcagttggcc
aacctgctcccagactacgagatcgcctgcgaacacgagcattccaactgtctgctgctc
tcgcatcacaagttcaaagtgggaggagagtggtggacgtggatcgactacgagcgattc
caagaacttattcaggaatatgaggaaagtggaggcaccaagagcttctcagccattgac
tatatggccaagacccccacctgggccctttttggggccaaagagagagggtttgaacct
tcggacacacggtttcagagaaagaacaagaccaaagatatttcggggtgttga
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