Triplophysa dalaica: 130429983
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Entry
130429983 CDS
T09616
Symbol
crocc2
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tdw03037
]
130429983 (crocc2)
Cilium and associated proteins [BR:
tdw03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130429983 (crocc2)
BRITE hierarchy
Motif
Pfam:
Rootletin
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
130429983
NCBI-ProteinID:
XP_056614826
EnsemblRapid:
ENSTDLG00000009400
LinkDB
All DBs
Position
10:90341..104010
Genome browser
AA seq
2012 aa
AA seq
DB search
MSTSDSRLESVIQRLEESVLSEDKWLTVGGSSPEESASLPARVREIVSRNLSDTGMSSGL
SLQEENRLLQSELSRVEDLLAHSRAERDELAIKYSAISERLEQVLRLEGGDRGMDSPESR
SLTQQNVDLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKKKCGDLEQMLM
EKSTELEKHELTGRCDFSSNGHRREEDEHSSDLESALIRLEEEQQRSSGLSAVNSMLREQ
LEQAGLANEALSQDIRRLTADWTKAREELEQRESDWRREEESFHSYFTSEHSRLLSLWRQ
VVGFRRHVCELKSATERDLSNMRKELVCASQSAQLQCVSVCSALRSREDGSALVLERETA
QRLQLEQQLRETLTDMMSLQSKSDSDRAGLNTRLADAGRDVECLKARIEDQEQEIITLNN
KLQDQSSHEESEVNILKTHTAALQSTLRDVTQMLFSDCEPPDGSIEEVVLPLLRSSSTSS
HIIPDTCLSALRSALNNRQLQLQELRERLQSAQSSVQQLRRQLGEAESGQQHAELRLQAL
QAERDEAHRERETAVRERDRLRKERDTLSSVKDGVDKAAQGAQTQVQQLQLEGEKLHLAV
TSAQRERDHEREEKDAITLERDRARAETDRIQQLREGSETRSSSLRAELSAVRESLQQVM
IERQLMDTENTQLTDALNRSESSRAEISLLLSKLQSEESSLRDSLAKMSNINESLAHDKS
DLNSLIIQLEEDKNVLVCQRREAEQEKLTIRDELVRSEQNRLELDSVRLTLHQSLQESEL
ARVGLEAELQTLRADRGKLQDSISQQLVGEVSALEAELGAVRGEGDRQSTALEEAGRGRA
ELARERAGLLVQLMASERENAAFTEEIASFRSEREALETSLFEVQQQMNQIESRRENLES
ENQHLRLRTDTLTAELKQLRADRETVLSQSEREKDMLRDALTAAQQEAQRSLRMALSDHQ
EELERLTKQKEALRCSLEAEHQVALRQIQEQLDEQINKLEKERDELQQELQSLQRDRDQR
LLQAETDKQQALSMKEAEKAVLSERVCSLQTELSTAVLELERNNRDMILLKDQQRVAVAA
LNTELQELDSQLQDTVSSHERELRRLQENCADQQIRANTALREFEECRTLLSASEESRDT
TKRELLEMEKRLCQIRDAEEGHRRDGVELRRSISDVTQEKDALSQSNVQLREALRVAESE
RISVKRVCEEREQKVSLLEENLASAQKEVSDLRSCLREVERSRLEARRELQELRRQVKVL
DTDREQMGRQVAELQTRLSAEDQRDEERAKEIITLKLKLSDTETSRNALQKDVGSLQRRL
SESESCWRSRERELMCHLQEARGCEKKLQDEARNLATRAQTASDASVRMQLQLSEAQGRL
AATDAELSRAEASRRDLEFRLCSLQSALTRTLGIGTRGRSSSRGRSPLGSSPSSLISLSG
RRSVSPLRCSLSPAKDVAGNITPENTVVLSPLSPERTDAPLPVAPPELDPETLRSGLRDF
LQELRDAQRERDEARGQLGSLQREFQEVTSERDSAHQRVLQLHNTLQECQEDKRVLDDKL
STTQAQIHQQEELQRRGERDRRALNDKIKELERILLNTEAERRRVEEQCGKLRAGEARMD
AERRRVREALEAAEGRGTQVELERRSLEGELQRLRLSLAERETEIQSANERHENIIKQVA
EGEGNISSLQREVDRLTLLLSKAQEAETVQKERALALSQDLQEATAAHSVTQGRLAALQK
TLGQTENERRQLQERADGLRSSVSDEKRNATALMEQAQTLQSELSQSQLRRSELETELQN
TQEALRQRSDGLAEAQRGLQAAHADKVSLEERLRSLQRAVALLETEKRDVERQAVRLEKD
KSALRNTLDKVERQKLQTEESSMRLSAEKGRLDRALNGAEQELQDTQRQIALLQEELFGV
KQKITVCLAQLAELEQTHSASAQSARLREEAQREAERLRIGQREAERALAARERVHRQRV
KGLEEQVSTLKEQLQHEIRRRTPFISPTSTVG
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgagtgactcgaggctggagtctgtcattcagaggttggaggagagcgttctg
tctgaagacaagtggctgacggttggaggatcttctccagaggaatcagcgagtttaccg
gctcgtgtacgagagattgtgtccagaaacctgagtgacaccgggatgtcgtcgggtttg
tctcttcaggaggagaaccgtctcctgcagtcagaactgagtcgtgtggaggatctgctg
gcccacagtcgagccgagagagatgaactggccatcaaatacagcgccatcagtgagagg
ttggagcaggtgttgcgtttggaggggggtgatagggggatggactcacctgagtctcgc
agtctgacgcagcagaatgtggatctgcgcagacgcttggatgaggagcaggcggcgtac
aaacgcaaactcacagcgtatcaggagggacaacagagacaagctcaactcgtacagaaa
ctacaagccaaagttctgcagtataagaagaagtgtggagatcttgagcagatgctgatg
gagaaatcaactgaactagagaaacacgaactcaccggtcggtgtgatttcagcagtaac
ggtcatcgcagggaagaagatgaacacagcagtgatttggagagcgccctcatccgtctg
gaggaggaacagcagaggagcagcggcctatccgcagtcaactcaatgctgcgcgagcag
ctggaacaggccggactggccaatgaggcgctcagtcaggacatccgcagactcactgcc
gattggaccaaagccagagaagagctggagcagagagagtctgattggaggagagaagag
gagtcttttcacagttacttcaccagcgagcacagtcgtctgctgtcgctctggagacag
gtggtgggcttccgcagacacgtgtgtgaactcaagagcgccaccgagagggatctgtcg
aacatgaggaaggagcttgtgtgcgcgtctcagagcgctcagctgcagtgtgtgagcgtg
tgttcggctctgaggagtcgtgaggacggctcagctctggttctggagagagagacggct
cagagactgcagctggagcagcagctgagagagacgctcactgacatgatgtcattacag
agcaagagtgattcagacagagccggactcaacacacggcttgcagatgcagggagggat
gtagagtgtctcaaagctcgtatagaggaccaggaacaagaaatcataacactcaataat
aaactacaggatcagagcagtcatgaggaatctgaagtgaatattctgaagacacacaca
gcagcgctgcagagcacactcagagacgtcacacagatgctgttttctgactgtgagcct
cctgatggaagcattgaagaggttgtgttgcctctcctgcgctcttcatcaacatcatca
cacatcatccctgacacctgtctgtctgctctccgctcagctctgaataacagacaactc
cagctccaggagctgcgagagcgtctgcagtctgcgcagtcatcagtccagcagctgcgc
agacagctgggagaggcggagtctggccaacagcatgcagagctccgtctgcaggcgctt
caggcggagagagatgaggctcacagagagagagagacagctgtgagagagagagacaga
ctgagaaaagagagagacacgctgagcagtgtgaaggacggtgtggataaagcagcacag
ggggcgcagacgcaggtgcagcagctgcagctggagggtgagaaactgcatcttgccgtg
acgtctgcgcagagagagagagaccatgagagagaagagaaagacgccatcacactggag
agagaccgagcccgagccgagacagacagaattcagcagctgagggaggggtcagagact
cgctcatcttctcttcgagctgaactgtctgcagtgagagaatctctccagcaggtgatg
atagagagacagctgatggacactgagaacacacaactgacagatgcgctcaacaggagc
gagtcgagccgtgctgagatctcactgttgctcagtaagcttcagtctgaggagtcgtca
ctcagagattcactcgctaagatgagcaacatcaacgagagcctcgcacacgacaaatct
gatctcaacagcctcatcatacagctggaggaggacaagaacgtcttggtgtgtcagaga
agagaagctgaacaagagaagctgaccatcagagatgaacttgtgcgctctgagcagaac
agactcgagctggattctgtacgtctcactctacaccaatcactgcaggagtctgagctg
gccagggtggggttggaggcggagcttcagacactgcgggcagacagaggcaaattacag
gacagtatttcacagcagctggtcggggaggtgagcgctttggaggcggagctcggtgct
gtccgtggtgaaggggacaggcagagcactgctcttgaggaagcagggcgtgggcgggcg
gagcttgcacgagagagggcggggctcttggttcagctgatggcatcggagagagagaac
gctgcatttaccgaagagatcgcttcctttaggtcagagagagaggctctggagacgagt
ctgtttgaggtacaacagcaaatgaatcagattgagtctcgacgagaaaatctggagtca
gagaaccagcatctgcgtctgcgcactgacacattaacagctgagttgaagcagttgcgt
gctgacagagagacagttttgtctcagagtgagagagagaaggacatgctgagagatgca
ctgacggccgctcaacaggaagcacagcgatctctgcgcatggctctctctgaccaccag
gaggagcttgagagactgaccaaacagaaggaggcactgcgctgcagtctggaggctgaa
caccaggtggcgctgcgacagatccaagaacagctggatgagcagataaacaaactggag
aaagagcgagatgaacttcagcaggagcttcagtcactgcagcgagacagagatcagcgt
cttctgcaggccgagaccgacaaacagcaggcgctgtccatgaaggaggcagagaaagcg
gttctatctgagagagtgtgctcccttcagacagagctgagtactgcagtgcttgaactg
gagagaaacaaccgagacatgattctcctcaaagaccagcagcgggttgcagtcgcagct
ctaaacacagagctgcaggaactggacagtcagctgcaggacacagtgagttcacatgag
cgtgagctgcgcagactgcaggagaactgcgcagaccagcagattcgagcaaacacagca
ctcagagagtttgaagaatgtcgtacactgctctccgccagcgaggagagtcgagacacc
acaaagcgagaacttttggagatggagaagcgtttgtgccaaatacgggatgcagaggag
gggcatagacgagatggggtggagctacgacggtccatcagtgatgtcacccaagagaaa
gacgctctgagccaatcaaacgttcagctgagagaagcactgagagtggctgagagcgag
aggatcagtgtgaagcgtgtgtgtgaggagagagagcagaaagtgtcactgctggaggaa
aatctagcatctgcgcaaaaggaggtgtcagatctgcgcagctgtctgcgtgaggtggag
agatcaagactggaggcgcgcagagagctgcaggaactgcgcaggcaggtgaaggttctg
gatactgatcgagagcagatgggacggcaggtggctgagctgcagacgcgtctgtctgcg
gaagatcagagagatgaggagagagcgaaagaaattatcaccctcaaactgaaactcagc
gacacagaaacgtccagaaatgctcttcagaaagatgtgggttctctccagaggcgtctg
agcgagagcgaatcgtgctggcgcagtcgggagcgagagttaatgtgtcatctacaggag
gctcgcggctgtgaaaagaagctccaggacgaggcgcgtaatctcgccacgcgtgcgcag
acggcctccgatgcgtctgtgcggatgcagctgcagctgagcgaggcgcagggtcgtctg
gctgcgaccgatgcggagctgtcacgcgcagaggcgtcccgcagagatctagagttccgg
ctgtgcagtctgcagtcggcgcttacgcgtacgctaggcattgggaccagggggcggagc
agcagcagagggcggagtccgctcggctcctccccatcctctctgatatctctctccgga
cgtaggagcgtgtctccactgcgctgctcgctgtcgccagccaaagatgtggcaggtaac
atcactcctgaaaacacagttgtgctgagcccgttgtctccagagaggaccgatgccccg
ctgcccgtcgccccgcctgagctcgaccctgaaactcttcggagcggcctgagagacttc
ctgcaggagctgcgagacgctcagagagaacgagatgaggcacggggtcaactggggtca
ctgcagagagagtttcaggaagtgacatcagagagagactccgcccaccagcgtgtcctt
cagctacacaatacactacaagagtgtcaagaggataagcgtgtgctggatgacaaactg
tcgaccactcaagctcagatacatcagcaggaagagctgcagcggagaggagagagagac
agacgagcattaaacgacaaaatcaaagagctggagagaatcttactgaacacagaagct
gaacgcaggcgtgtggaggagcagtgcggtaaactgagggccggagaggcacggatggat
gcggagcggcgccgggtgcgtgaggcgttggaggcggctgaagggcgtggcacacaggtg
gagctggagaggcggagcttagagggagagctgcagagactgagattgagtctggcggag
agagagacggagatccagtctgctaatgaacgacatgagaacatcatcaaacaggtggca
gagggtgaaggaaatatctcgtctcttcagagagaggtggacagactgacgctcctactg
tcgaaagctcaggaggcagagacggttcagaaagaacgagccctcgctctctctcaggac
ctgcaggaagccacggcagctcacagcgtcactcaagggcgtctggcggcgctgcagaaa
acactgggtcagactgagaatgaacgcagacagctgcaggagcgtgcagacggactcaga
tcatccgtttctgatgagaagcgtaacgccaccgctctgatggagcaagcgcagacactg
cagtcagaactgagtcagagtcagctgcgcagatctgaactggagacggagctacagaac
acacaggaggctctgcggcagaggtctgacggtctggccgaagctcagcgcggtctacag
gcggctcacgcagataaagtgtctttagaagagcgtctgcgcagtttgcagagagcggta
gcgttgctggagacagagaagagagatgtggagagacaggccgtccgcctggagaaagac
aaaagcgcgttgaggaacacactggataaggtggagcgacagaagctgcagacggaggag
agcagcatgcgtctgtctgcagagaaaggacgactggatcgcgcgctcaatggcgcagaa
caagagctgcaggacacacagagacagatcgcactgctgcaggaagagttgtttggtgtt
aaacagaagatcacagtgtgtctggcgcagctggctgaactggagcaaactcacagcgcg
agcgcgcagtcggcccgtctgcgtgaggaagcacagcgcgaggccgagcgtctgcgcatc
ggtcagagagaggcggagcgagcgctagcggcacgtgagagagttcaccgtcagcgggtc
aaaggtctggaggaacaagtgtcaactctgaaggaacaattacagcacgagatcagacgc
agaaccccgttcatatcgcccacatccacggtcggctga
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integrated database retrieval system