Triplophysa dalaica: 130440010
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Entry
130440010 CDS
T09616
Symbol
stambpb
Name
(RefSeq) STAM binding protein b isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130440010 (stambpb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdw01002
]
130440010 (stambpb)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130440010 (stambpb)
04121 Ubiquitin system [BR:
tdw04121
]
130440010 (stambpb)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130440010 (stambpb)
Peptidases and inhibitors [BR:
tdw01002
]
Metallo peptidases
Family M67
130440010 (stambpb)
Membrane trafficking [BR:
tdw04131
]
Endosome - Lysosome transport
Others
Others
130440010 (stambpb)
Ubiquitin system [BR:
tdw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
130440010 (stambpb)
BRITE hierarchy
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
130440010
NCBI-ProteinID:
XP_056628737
EnsemblRapid:
ENSTDLG00000017363
LinkDB
All DBs
Position
18:19419830..19425978
Genome browser
AA seq
424 aa
AA seq
DB search
MLDHADVSLTPEQRVRALTKKGSTVDMNEAVPLRRYFRSGMEMIRMAHVYAEEGNTEHAF
VLYNKYITLFIEKLPKRPEYKLPNIPEKKETLRKLKEIAFPQAELLKKHLLKRYENEYAE
YLSKKQREETAAMERELSRQRELEAERQRVADMQRRQLEQEQFSKFEEMIRQQERQHIIH
EFGTPARPQEDLLIPGVQGPPVPYPAPPSPPQSPEYPSANHGAPSAHSPAATPTFDRSLK
PDHLSNNTTMVEGLQQIAIPAELCSKFLQLANSNTIRAVETCGILCGSLNRNAFTVTHVI
VPKQCGGPDYCDTENEEELFLVQDQHNLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLP
ESIAIVCSPKFNETGYFRLTDYGMEEISTCTQKGFHPHPKEPPLFTNGSHIQITEGTVSM
LDLR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttggaccacgcagatgtgagtttgaccccggagcagagggtgcgggccttgaccaag
aagggcagcacggtggacatgaatgaagctgtccccctccgcagatactttcgctcgggc
atggagatgatccgcatggcccatgtgtatgcagaggagggcaacacagagcatgccttt
gttctctacaataaatacatcacgctttttatcgaaaagctccccaagcgtccagaatat
aagcttcctaatattcctgagaagaaggaaactttaaggaagttaaaggagatagccttc
cctcaagcagaactgctgaagaagcatttactaaagagatatgagaatgaatacgctgag
tatctcagcaaaaagcagcgagaagaaacagcagcgatggagcgggagttatctcgccag
cgggagctggaggcggaaaggcagcgtgtggcggatatgcagagaagacagctggagcag
gagcagttcagcaagtttgaggagatgatacgtcagcaggagcgccagcatatcatccac
gagttcggcaccccagctcgtcctcaggaagacctcctcatacccggggtccagggccca
cccgtgccttacccagcaccacccagtccccctcagagtccggagtacccctcagccaat
cacggcgctccgtcggctcacagcccagccgcaactcccacgtttgatcgctcactcaaa
ccggatcatctcagcaacaatactacaatggtagaaggcttacagcaaatagctattcct
gcagagctttgcagcaaattcctgcaactggccaatagtaacaccatcagagcagtggag
acgtgtgggattctctgtgggagcttgaacaggaacgctttcacagtgacgcacgtgatc
gtgccaaaacagtgcggtggtccagattactgtgacacagagaacgaagaagagctcttc
ctggtgcaggaccagcacaacctcattacgctcggctggatacatacccaccccacacag
acagctttcctctccagcgttgacctgcacacacactgctcttaccagatgatgctgcca
gagtccatcgccatcgtctgctctccaaagttcaacgagacaggctacttcaggttgaca
gactatggcatggaggagatctcaacctgtactcagaaaggctttcatcctcatccaaaa
gaacctccgctgtttacgaatggcagccacattcaaatcacagaaggcactgtatcaatg
ctcgacctacgatga
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