Candidatus Tenderia electrophaga: Tel_04015
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Entry
Tel_04015 CDS
T04171
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tee
Candidatus Tenderia electrophaga
Pathway
tee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tel_04015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tee03021
]
Tel_04015
03400 DNA repair and recombination proteins [BR:
tee03400
]
Tel_04015
Enzymes [BR:
tee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tel_04015
Transcription machinery [BR:
tee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tel_04015
DNA repair and recombination proteins [BR:
tee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tel_04015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ALP52371
UniProt:
A0A0S2TBA0
LinkDB
All DBs
Position
866259..870455
Genome browser
AA seq
1398 aa
AA seq
DB search
MKDLLNLLKQQGQSNDEFDAIRIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCA
KIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTVAKVRRERMGHIELASPVAHIWFLKS
LPSRMGLLLDMTLRDIERVLYFEAFVVIEPGMTQLEKNQLLTDEGYLDAIEEYGDDFDAR
MGAEAILELLNAMNLQTEVARLREEIPNTNSETKIKKLTKRLKLMEAFLESGNKPQWMVM
SVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRML
QESVDALLDNGRRGKAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGP
TLKLHQCGLPKKMALELFKPFIFSKLELRGLATTIKAAKKMVEREGPEVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAYNADFDGDQMAVHVPLSLEAQLE
ARALMMATNNVLSPANGEPIIVPSQDVVLGLYYMTREGVNVTGEGMAFSDLAELRRAWET
GAASIHAKVKVRIKENVLDEETGESHESINLVDTTVGRALLAELLPKGLPFELFNQAMTK
KAISGLINTCYRRLGLKATVIFADQLMYTGFSFSTRAGVSIGVNDMEVPVEKEAIISAAA
EEVKEIENQYISGLVTNGERYNKVVDIWSHTNDRVAKAMMDKLGTDVVYDKDGKEVRQDS
FNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVAQDLVVTDADCGTTHGLLMMPLIEGGDVVEPLRER
VLGRVVVEDVRIPGSDEILVPNGTLLDERWVDRLEEAAIDQVMVRSPISCETRYGVCAAC
YGRDLARGHRVNTGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSAAENNVEVKSNGRA
RLHNIKIVKHASGDNVAVSRSGELIVVDEQGRDRERYKIPYGAVLSVDDGEAVSAGQVVA
NWDPHTHPVVTEVAGQIKFSDFVESVSVQRTTDEITGLTSLVVTDPKARGAAGKDLKPMV
KLVDENGDNLCIAGTDIPAMYFLPAGAIVGLEDGAKVGVGDVLARIPQESSKTRDITGGL
PRVADLFEARKPKDPAILAEATGTVGFGKETKGKRRLVITDKDGERHEELIPKWRHINVF
EGEHVERGEVVVDGPPAPHDILRLKGISELAGYIVNEVQEVYRLQGVKINDKHIEVIIRQ
MLRKVEITSAGDSKFLKGEQLECARVLDENDRLMAAGKIPATFDPVLLGITKASLATESF
ISAASFQETTRVLTEAAVSGKMDDLRGLKENVIVGRLIPAGTGLAYHDERRRKRLGVETE
GEQAPTASEVEEALSKAL
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatctattgaatcttttaaagcaacagggtcaaagcaacgacgaattcgatgcc
atccgcatcggtctggcatcgccggaaaaaattcgttcctggtctttcggtgaggtaaaa
aaacccgagaccatcaactaccgcaccttcaagccggagcgcgacgggttgttctgcgcc
aagatattcgggccggtgaaggactatgaatgtttatgcggcaagtacaagcgcctgaag
catcgcggtgtaatctgtgaaaagtgcggtgttgaagtcacggtcgccaaggtgcggcgc
gagcgtatgggccacatcgagctggccagcccggtagcgcatatctggttcctcaagtcc
ttgccttcgcgcatggggctgttgctggatatgaccttgcgcgacatcgagcgggtgctc
tatttcgaggccttcgtggtcatcgagccgggcatgacgcagctggaaaagaaccagctg
ctcaccgacgaaggctatctcgatgccatcgaggaatacggtgacgatttcgacgcgcgc
atgggggccgaggcgattctcgagctgctcaatgccatgaatctgcaaaccgaagtggcc
aggctgcgtgaagagatccccaacaccaattcagagaccaagatcaagaagctgaccaag
cggctaaaactgatggaggccttcctggaatccggcaacaagccgcagtggatggtgatg
tcggtgttgcccgtgttgccgccggagttgcgccctctggtgccgctggacggtggccgc
ttcgccacctcggatctgaatgatctttatcgtcgcgtcatcaatcgtaacaaccgtctg
aagcgcctgttggacctgaacgcgccggatatcatcgtgcgcaacgaaaagcgcatgctg
caggagtcggtggacgcgctgctggacaacggtcgccgcggcaaggccatcaccggcacc
aacaagcgtccgctgaaatccttggccgacatgatcaagggtaaacagggccgcttccgt
cagaatctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccg
accctgaaactgcatcagtgcggcctgcccaagaagatggcgctggagctgttcaagccc
ttcatcttcagtaagctggagctgcgcggtctggccaccaccatcaaggcggccaagaag
atggtcgaacgcgaaggtcccgaagtatgggacattctggaagaggtgatccgcgagcat
ccggtcatgctcaaccgcgccccgaccctgcatcgtctcggcatccaggccttcgagccg
gtgctcatcgaaggtaaggctatccagctgcatccgctggtctgtaccgcctacaacgcc
gacttcgacggcgaccagatggcggtgcacgtgcccctctcgctagaggctcagctggaa
gctcgcgccctgatgatggccaccaacaacgtgctgtcgcccgccaacggcgagcccatc
atcgtgccctcgcaggatgtggtgctgggcctgtattacatgacccgcgaaggcgtgaac
gtgacgggcgaaggcatggccttctcggatctggccgagctgcgccgcgcctgggagacc
ggcgccgccagtatccacgccaaggtcaaggtgcgcatcaaggaaaacgtgctggacgaa
gagaccggtgaatcacacgagtctatcaatctcgtcgataccaccgtcggccgcgccttg
ctggccgaactgttgcccaaggggctgcccttcgagcttttcaatcaggcgatgaccaag
aaagcgatttcgggtctgatcaacacctgttaccgccgtctgggtctgaaggcgaccgtt
atctttgctgaccagctgatgtataccggtttcagcttctctacccgcgcaggtgtctcc
atcggtgtcaacgacatggaggtgccggtcgagaaggaagcgatcatcagcgccgccgcc
gaagaggtgaaggagattgagaaccaatatatctccggtttggtcaccaacggcgagcgc
tacaacaaagtggtcgatatctggtcgcacaccaatgaccgggtcgccaaggctatgatg
gacaagctgggtaccgacgttgtctacgataaggacggtaaggaagtgcgccaggattcg
tttaactccatcttcatgatggccgattccggcgcccgtggtagtgccgcccagattcgt
cagttggcggggatgcgcggcttgatggcgaagccggacggctccatcatcgagacgccg
attacggccaacttccgtgaaggtctgaacgtcctgcagtacttcatctccacccacggc
gcccgtaagggtctggccgatactgctctgaagaccgccaactcgggttatctgacccgt
cgtctggtggacgtggcgcaggatctggtggtgaccgatgccgattgcggcaccacccat
gggctgctgatgatgccgttgatcgaaggcggcgacgtggtcgaaccgctgcgcgaacgg
gtgctgggtcgcgtagtggtggaagatgtgcgtattcccggcagcgacgaaatattggtg
cccaacggcacgctgctggacgagcgctgggtggaccgcctggaagaggcggccatcgac
caggtgatggtgcgttcgcctatcagctgtgaaacccgctacggtgtctgcgccgcctgt
tacggtcgtgacttggcgcgcggccaccgggtcaataccggtgaggcggtcggcgtgatc
gccgcccagtccatcggtgagccgggcacccagctgaccatgcgtaccttccacatcggt
ggcgcggcgtcgcgctccgcggcggagaataacgtcgaggtcaaatccaacggtcgtgcc
cgactgcacaacatcaagatcgtcaagcatgccagcggcgataatgtggcggtgtcacgt
tccggtgagttgatcgtggtcgacgagcaaggccgcgatcgtgagcgctacaagattcct
tacggtgcagtgctgtcggtggatgacggtgaggccgtttccgccggtcaggtggtcgct
aactgggatccccacacccatccggtggtcaccgaagtggccggtcagatcaagttcagc
gattttgtcgagagtgtcagcgtacagcgcaccaccgacgagattaccgggctgaccagt
ctggtggtgaccgatcccaaggcgcgcggggctgcgggtaaggatctcaagcccatggtc
aagctggtggatgaaaacggcgacaatctgtgtatcgccggcaccgatatcccggccatg
tacttcctcccggcaggcgccatcgtcggtctggaagacggcgccaaggtgggcgtgggt
gacgtcctggcgcgtattccgcaggagtcgtccaagacccgcgacatcaccggggggctg
ccgcgtgttgccgacctgttcgaggcgcgcaaacccaaggatccggcgattctggcggag
gccacgggtaccgtcggcttcggcaaggagaccaagggcaagcgccgtctggtgatcacc
gacaaggacggcgagcggcatgaggaactgattcccaagtggcgtcacatcaatgtgttc
gagggtgagcacgtcgagcgtggtgaagtggtggtggacggtccgccggcaccgcacgac
atcctgcgcctgaaggggatttcggaattggccggttatatcgtcaacgaggttcaggag
gtctaccgtctgcagggggtgaagatcaacgacaagcacatcgaggtcattattcgccag
atgctgcgcaaggttgagatcaccagtgccggtgacagcaagttcctcaagggcgagcag
ttggagtgcgcccgcgtgctggacgagaacgacaggctgatggcggctggtaagattccg
gccacctttgatccggtgctgttgggtatcaccaaggcgtcactggcgaccgagtccttc
atctcagcggcctccttccaggagaccacccgcgtgcttactgaggcggcggtgtccggc
aagatggacgacctgcgcggtctcaaggaaaacgtcatcgtcggccgtctgatcccggca
ggaacgggactggcctatcacgatgaacggcgccgcaagcgcctgggcgtggagaccgag
ggcgagcaggccccgaccgccagcgaggtggaagaggcgctaagcaaggccttgtaa
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integrated database retrieval system
