Terrilactibacillus sp. S3-3: QS257_15235
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Entry
QS257_15235 CDS
T09189
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
tei
Terrilactibacillus sp. S3-3
Brite
KEGG Orthology (KO) [BR:
tei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
QS257_15235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tei03400
]
QS257_15235
Enzymes [BR:
tei01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
QS257_15235
DNA repair and recombination proteins [BR:
tei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
QS257_15235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
WKB35070
LinkDB
All DBs
Position
2505418..2505897
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AA seq
159 aa
AA seq
DB search
MIKEILDQLHLISFIKTSGNKGLQIFLPLPEGVFNYKDTRLFMTFVADVLLEKEPALFTT
ERLKKNRGKRLYLDVVQHAEGKTIIAPYSARGNPEALISTPLFWDEVNEDLRPEKFPINT
IVERVKQKGCPFADFFQFKQTQPLSPVLAALKKQNGTYE
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagagatactcgatcagcttcacctgatatcttttattaagacatcgggaaat
aagggtctgcaaatttttctgcctctgcctgaaggcgtctttaattataaagacacgcgg
ctgttcatgacatttgttgccgatgtccttttggaaaaggaaccggcgctttttacgacc
gaacgtctcaaaaaaaaccggggcaaaaggctttacttagatgttgtccaacatgcggaa
ggaaagacgatcattgcgccttattcggctcggggaaaccctgaagccttgatcagcacc
cctcttttttgggatgaagtcaatgaagatctgcggcccgaaaaattcccgataaacacc
attgttgaacgcgtgaaacaaaagggctgtccctttgccgatttttttcagttcaaacaa
acgcagcctctttcaccggtattagccgctctgaaaaaacaaaacgggacttacgagtag
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