Tauraco erythrolophus (red-crested turaco): 104369909
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Entry
104369909 CDS
T08611
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104369909 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
teo03400
]
104369909 (LIG4)
Enzymes [BR:
teo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104369909 (LIG4)
DNA repair and recombination proteins [BR:
teo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104369909 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
BRCT_2
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
SKA1
Motif
Other DBs
NCBI-GeneID:
104369909
NCBI-ProteinID:
XP_009988768
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MASAPVSQPSPKKTVASHVPFADLCSTLERIQTCKSRPEKTKYFKDFLDSWRKFHDALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTP
AGSRGDAGDFAMIAYFVIKPRSPKQGRLTIEQVNEHLDAIANNNAAKKKDLLKKSLLQLI
TQSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPCVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMNNQIFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLDGSLTPFIHNVFKSNIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMV
EDSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILNSVFTPVKGRIYVVHKKSARTRKEVI
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVSGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAIAETPPVNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWKPYNRKDPP
CNILCGTEKPEMYIEPCNSVIVQIKAAEIVDSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEDLRSKAEGKLASKHLYIDEYDEPQEKKRKTVPKVKKIIGIAEQFKAPDLSNVSKV
SNVFEDVEFCVMTGTGKHSKSELESRIAECGGSVVQNPGPETYCVIVGAENVRVKNIIAS
NKYDVVRAEWLLQCFQTKMLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTADVDVAQLK
EVFSRMKDNKVVPLDIIAELEERYSWNSCQLSIFRGNTVYVDCYAVVNEPKTKIHGTTLS
VRALELRFYGAKVVSHLEEGVSHVVTGEDHSRVKEVKALRRTFEKKFKIVSELWVTESVE
EGVLQNDNQYLI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcacctgtttcacagccttctcctaaaaaaacagtggcctctcacgtgcct
tttgcagatctgtgttccactctggagcgaatacagacgtgtaaatctcgtccagagaaa
accaagtatttcaaagatttcctggattcctggagaaaattccatgatgctcttcatcaa
aaagagaaagacgtcacagattctttttatccagctatgcgccttattcttccgcagttg
gaaagagaaaggatggcgtatggaattaaagaaactatgcttgcgaagctgtatattgaa
ctgcttaatttaccaaaagatggaaaagatgctgcaaagcttttaaattacagaacacct
gctggctcacgtggagatgccggagattttgcaatgatcgcatactttgtgataaaacct
aggagcccaaaacaagggagactgacaatagaacaagtcaatgagcacttagatgcgata
gctaataataatgctgccaaaaaaaaggatttgttaaagaaaagtcttcttcagttaatt
acccagagcacagcactggaacaaaaatggctcatccggatgattataaaggatctaaag
cttggtgttagtcaacaaactatattttccatttttcatcccgatgctgctgaattacac
aatgtcacaactgatttggaaaaagtttgcagacagctgcatgatccctgcgtctcactt
agcgatgtttctatcatgttgttttctgcctttaagccaatgcttgctgctattgccgat
gtccagcaaattgagaagcaaatgaataaccagatattctacatagaaactaagctggat
ggtgaacgcatgcagatgcacaaagacggagatgtgtataaatatttttcccgaaacggg
tttgactatactcagcagtttggtgcttctccccttgatggttcgttaacgccgtttatt
cacaatgtatttaagagcaatatacaaaattgcattctcgatggcgaaatgatggcgtac
aaccctgagacgcaaacctttatgcaaaaagggaacaaatttgacataaaaagaatggtg
gaggactctgatcttcagacctgcttctgtgtgtttgatgtgttgatggttaacgatcag
aagctgggtcatgaagtgctaagcaaaagatacgaaatcttaaatagcgtgtttaccccg
gtaaaggggaggatatatgttgtacataaaaaaagtgccagaacgagaaaagaagtaatt
gatgctttaaatgaggcgatagataacagagaggaagggattatggtgaaagatcccatg
tccacctacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatacgtc
agtgggctgatggatgaactagaccttttaattgttggtggctactggggaaagggctca
cgtggtggaatgatgtctcattttctgtgcgctattgcagagacgccccctgtgaatgaa
aaaccaaccgttttccactctatttgtcgtgttggctctggctatactatgaaggagttg
tatgatttaggtttgaaactggctaaacactggaagccctacaataggaaggaccctccc
tgtaacattttgtgtggaactgaaaaacctgaaatgtacattgaaccttgcaactctgtc
atcgttcaaatcaaggcagccgagattgttgacagtgacatgtacaaaactgactgtact
ttgagattcccccgaattgagaagataagagaggacaaagaatggtatgaatgcatgact
tcagacatgttagaagacctcagaagcaaagcagaagggaagctggcatctaagcacctt
tatatagatgagtatgatgagccacaagagaaaaaaaggaaaactgtaccaaaggtgaag
aagataattggaatagctgagcaatttaaagctcctgatctttctaatgtaagcaaggtt
tcaaatgtatttgaggatgttgagttttgtgttatgacaggaacaggaaaacactcaaag
tctgaactggaaagcagaatagctgaatgtggcggcagcgtggtacagaacccagggccg
gagacttactgtgtcattgtaggagctgagaacgtcagagtgaaaaacatcattgcttcc
aacaaatacgatgtggtgagggcagagtggctccttcagtgttttcaaaccaaaatgctg
gtgccttggcagccagcctttatgattcacatgtctcctgacacgaaagaacattttgct
cgtgagtatgattgttatggagacagctacacagcagacgtagatgttgcacaactcaag
gaagtgttctcaagaatgaaagacaataaggtggtgcctttggacataattgcagagtta
gaagaacgttattcgtggaacagttgtcagctcagtatattccgaggaaacactgtttat
gtggattgttatgctgttgttaatgagcccaaaaccaaaatccatggaacaacactatca
gttagagctttggagctccgtttttatggtgcgaaagtagtctctcaccttgaagagggc
gtctcccatgttgttacaggagaagatcattcccgggtaaaagaggtgaaagcactaagg
agaacatttgagaaaaaatttaaaatcgtatctgagttgtgggtaacagagtcagtggag
gaaggagtcctgcagaatgacaatcagtacttaatataa
DBGET
integrated database retrieval system
