Tauraco erythrolophus (red-crested turaco): 104378599
Help
Entry
104378599 CDS
T08611
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03013
Nucleocytoplasmic transport
teo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104378599 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
104378599 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teo03019
]
104378599 (THOC1)
03041 Spliceosome [BR:
teo03041
]
104378599 (THOC1)
Messenger RNA biogenesis [BR:
teo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104378599 (THOC1)
Spliceosome [BR:
teo03041
]
Complex C
Other components
EJC/TREX
104378599 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104378599 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
104378599
NCBI-ProteinID:
XP_009983952
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
RAGLDAWRGLWAAPFAARFVGRGWDPHGSGRGTDTRSTSTREALINKSIKPLLNAFNQIP
GSENEKKCTLDQAFRVVVEEEIINKAACENLLAIISLAINGVTEGICTASTPFVLLGDVL
DCLPLDQCDKIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQL
FLARLFPLSEKSGLNLQSQFNLENVTVFNTNEHESTLGQKHTEEREEGMDVEEGEMGDDE
APTSCSIPIDYNLYRKFWSLQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQA
SRKKLEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSS
NYVLTDEQSLWIEDTTKAVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVK
ERSQPEFQLGPPDSKPMRPVRKRPAPEDFLGKGPNKKILMGNEELTRLWNLCPDNMEACK
SESREYMPTLEEFFEEAIEQADPENMVENKYKAVNNSNYGWRALRLLARRSPHFFQPTNQ
QFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENNESPEVQRDKAMTGE
QIELFANRLGEQWKALAPYLEMKDSDIRQIELDSEDVKMRAKQLLVAWQDQEGTHATPEN
LITALNKAGLGDLAESLTNDTEGSS
NT seq
2060 nt
NT seq
+upstream
nt +downstream
nt
agcgggcggggctggatgcgtggcggggcctctgggccgcgccgtttgcggcccggtttg
ttggacggggatgggacccgcacggaagcggtcgaggcacggacactcgctccacgtcca
ccagagaggctctgattaacaaaagtatcaagccattgttgaatgcgtttaaccagattc
ctgggagtgaaaatgaaaagaagtgtaccttggatcaagcgtttagagttgttgtagaag
aagaaataataaacaaagctgcatgtgaaaatctcctggcaattatttctcttgcaatta
atggagtcacagaaggtatctgcactgcatcaaccccttttgtgctcctgggggatgttc
tggattgcctacctttggatcagtgtgacaaaatcttcacttttgtggagaaaaatgttg
ctacatggaaatcgaatacattttactcggcagggaaaaattatttgctacgaatgtgca
atgacctcctaagaagattatctaagtcacaaaacacagtcttctgtggaagaattcagc
tgttcttggctaggttatttccactttcagaaaaatcaggactgaacttgcagagtcagt
ttaacctggaaaacgtcactgttttcaataccaatgaacatgagagcactctaggacaga
agcacactgaagagagagaggaaggaatggacgtagaagaaggtgaaatgggagacgatg
aagcaccaacaagttgttccattccaatagattataacctgtatagaaaattctggtcgc
ttcaagattattttagaaatcctgtgcagtgctatgagaaggtgtcgtggaagacttttc
ttaagtactcagaagaagttttggctgttttcaaaagttacaaattggatgacactcagg
cttcccgaaaaaagttggaagaactaaaaacaggaggagaacatgtatattttgccaagt
tcctaactagtgaaaagctgatggatttacagctgagtgacagtaactttcgccgtcaca
tcttgttgcagtacctaatactatttcagtatctaaagggacaggtcaaatttaagagtt
caaactatgttctaacagatgaacagtctctttggattgaggatactacaaaagcagttt
accagcttctttcagaaaatcctccagatggggaaagattctcaaaaatggtagagcata
tattaaatacggaagaaaactggaactcatggaaaaatgagggctgcccaagctttgtga
aagaaagatctcagccagagtttcagcttggacctcctgattctaagccaatgaggcctg
tgagaaagaggccagctccagaggactttttaggaaaaggaccaaacaaaaaaatcctta
tggggaatgaggaactgacccgcctttggaatttgtgtcctgacaacatggaagcttgta
aatctgagagcagggaatatatgccaacattggaggaattttttgaagaagctattgaac
aagcagaccctgaaaacatggttgaaaataagtataaggctgtgaacaattctaactatg
gctggagagcactgagacttctggcacgcagaagtccccacttcttccagccaacaaacc
aacaattcaagagtttacctgaatatctagaaaacatggtaatcaaattagccaaggagc
tgcctcctccttctgaagaaataaaaacaggcgaagatgaagatgaggaagataatgatg
ctttattaaaggaaaacaatgaaagtccagaggttcaacgggacaaagccatgacgggcg
aacagatcgagttatttgccaacaggctgggggagcagtggaaggccttggccccctact
tggaaatgaaggattctgatatacggcagatcgagttggacagcgaggacgtgaagatga
gagccaagcagctgctggttgcctggcaggatcaggagggcacccatgcgacccccgaga
atctgatcactgcgctgaacaaagccgggcttggtgacctcgcggagagcctaaccaatg
acacggaaggcagcagctag
DBGET
integrated database retrieval system
