Tauraco erythrolophus (red-crested turaco): 104378618
Help
Entry
104378618 CDS
T08611
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03250
Viral life cycle - HIV-1
teo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104378618 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104378618 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
teo03400
]
104378618 (SAMHD1)
DNA repair and recombination proteins [BR:
teo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104378618 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
ERAP1_C
Motif
Other DBs
NCBI-GeneID:
104378618
NCBI-ProteinID:
XP_009983976
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
LPAERLKVLACLNRLQQQHMDVMKVFNDPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGG
TYFVFPGASHNRFEHSIGVGYLAGCLVRALMERQPELDITQRDILCVEIAGLCHDLGHGP
FSHMFDGRFIPQIRPDSKWKHETASVKMFEHLIASNNLEEVMKSYGLVLEEDMIFIKEQI
AGPIDEAACGRSWPYRGRQKEKSFLYEIVANKKNGIDVDKWDYFARDCHHLGIQNNFDYK
RLLKFIRVCEVNNQKHICTRDKEVGNLYDMFHTRICLHRRAYQHKVGNIIEIMITEAFEK
ADKYFEIQGSGGKSYQISTAMDDMEAYTKLTDNIYLEILHSSRPELKEAREILHKIERRE
LYKFLGETQPETMMEIVKNNSLAESVANSKPEKNPPDVELKAEDFIIDVFNMDYGMKEQN
PIDNVLFYCKADPSQAVRIAKEQVSKLLPMTFAEQVIRAYCKSQDPDTVSAAKQYFIQWC
INNNCTKPQDGDVVAPHLTPMKESWNNMRGDERRIASEPSCKQRLPFDK
NT seq
1591 nt
NT seq
+upstream
nt +downstream
nt
cctcccagctgagagactgaaagtgctggcgtgcctgaacaggctgcagcagcagcacat
ggacgtgatgaaggtttttaatgatccgattcatgggcacattgaaatacatccgctgct
ggtccggatcatcgacacaccgcagtttcagcgcctccgatacattaagcagctgggtgg
cacttactttgtttttccaggagcctcccacaaccgcttcgaacactccataggggtggg
ctaccttgcaggatgtctggttcgtgcactgatggagagacaaccagaactggacataac
ccagcgagatatcctctgtgtagaaattgctgggctttgtcatgatttaggtcatgggcc
attttcgcacatgtttgatggaagatttattccacagattcgtccagactcgaagtggaa
gcatgaaactgcttctgttaaaatgtttgagcacttgatcgcttccaataacctagaaga
agtcatgaagtcgtatggtcttgtcctggaagaagatatgatcttcatcaaggagcaaat
agcagggcccatagatgaagccgcttgtgggagatcgtggccctaccgtggtcgacaaaa
ggagaaaagtttcctgtatgagatagtagctaacaaaaaaaacggcattgacgttgacaa
atgggattattttgcaagggattgccatcacctgggaatccagaataattttgattataa
gcgattacttaaattcattcgggtctgtgaagtgaataaccagaagcatatctgcacccg
tgacaaggaagttggaaatttgtatgatatgttccacacgcggatttgcctgcaccggcg
agcgtaccagcataaggttggcaacatcattgaaataatgattacagaagcctttgaaaa
agcagacaaatattttgagatacaaggctctggaggaaaatcgtaccagatatcgacagc
aatggatgacatggaagcctacactaagctaactgataacatctacctggaaattctgca
ctcaagtcgtccagaactaaaggaggcacgagaaattttgcacaaaatagaacggcggga
attatacaagtttttaggagagactcaacctgaaacaatgatggaaattgtaaagaacaa
cagcctggcagaaagtgttgctaattccaaaccagaaaagaatcctccagatgtggagct
aaaggctgaagatttcataattgatgttttcaatatggattatggaatgaaagaacagaa
tcccattgataacgttctcttctattgcaaggctgatccttcccaggcggtcaggatcgc
taaagagcaggtttcaaagcttttacccatgacgtttgcggagcaggttatccgggctta
ctgcaaaagtcaagatccagatactgtttcagctgcaaagcagtattttattcagtggtg
tataaataacaattgcaccaaaccacaggatggtgacgtggttgcccctcatctaactcc
aatgaaggaaagctggaataacatgagaggtgatgaacgcaggatagcttcagaacccag
ctgcaagcaaaggcttccttttgataagtaa
DBGET
integrated database retrieval system
