Tauraco erythrolophus (red-crested turaco): 104379698
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Entry
104379698 CDS
T08611
Symbol
RC3H2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
teo03000
]
104379698 (RC3H2)
04121 Ubiquitin system [BR:
teo04121
]
104379698 (RC3H2)
Transcription factors [BR:
teo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104379698 (RC3H2)
Ubiquitin system [BR:
teo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104379698 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104379698
NCBI-ProteinID:
XP_009985320
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIANLESGVPQLIPRCADTSLRALENTKKGGKTGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FSPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQPLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQWA
QYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSAS
SARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GSRLTLNLLSKEIDLRNGEVKKGTDYTEDCADTKPDRDIELELSALDTDEPDGQGEQIEE
ILDIQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTS
CFSQPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgacgtgcttcccgtaaactttgcactcctccagttagttggagcccaggtacctgac
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcgagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaagcttgtgacactggtgaattgt
cagctggtggaggaagagggtcgggtcagagctatgagggcagctaggtcactgggagag
agaaccgttacagaactcatcctgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctagaaccaagatttccccaggcctctaaaacaagcatcggt
catgttgtgcagctactgtatagagcgtcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttacgaggctttgcggagagaacat
gatgcccagattgttcacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttcccttctttatggtgacttggcacataaatcacacatgcaatccattattgacaag
ctccagtctccagaatctttcgcaaagagtgtgcaagaattgacaattgtcttgcagcgc
acgggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagacgcagcatctccaacatgggaacagctggaaaacgcaatggtcgct
gtaaaaactgtagtacatggactggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatataaaacaagtatgtgccgagaccttcga
cagcaagggggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaatatcgcttgaggaacaaaaaaatcagtgcaacagtgagaacgttcccccttcta
aataaagttggcgtaaatagcactgtctcaaccacaacaggaaacgtaatttctgtcata
ggaagccctgaagcaacaggaaagatggtaccaagtactaatggaatagctaatctagaa
agtggtgttccccagttgatccctcgctgtgcagatacctccttgagagctttggagaac
accaagaagggagggaagactggagccaatggccagaatgtttctgggtcccctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccatttgttcccagagtacctgtctaccctccacattctgataatgttcaatatttccaa
gatcccaggactcagctgtcatatgaagttccacagtacccgcagacaggatattatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagagtcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
ttttcccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctcccgtttatgacagcaggcgcatctgg
cgcccgcagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagccattacgagagagatacaactctttggatgggtat
tactctgtggcttgtcaacctccaaacgaacagaggactgtgcctttaccaagggagcct
tgtggtcatttgaagactggttatgacgagcaattgagacggaagccagagcaatgggcg
cagtaccacacacagaaaactcctctggtatcgtccacccttcctatggcaacaccatct
ccaacaccaccttctcctctcttcagtgtagatttcagtacggagttctcagagagtgtc
agtgatttgagtggaactaaatttgaggaagaccatctctctcactactcgccgtggtct
tgtggcactattggctcttgtataaacgctatcgactcggagcccaaggatgtgattgcc
aattcaaacgccgtgctaatggatttggacagtggggatgttaaaaggagagtgcattta
tttgaaactcagagaagggcaaaggaagaagatcctataatcccatttagtgatggaccg
atcatctccaagtggggtgcaatctccaggtcatcccgcacaggttatcacacgacagat
cctattcaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagattac
gtcccttatgtcaatgctgtcgactccagatggagtgcctatggctcggattctgcttcg
tcagcacgttacgcagaacgggacaggttcatagttacagatttgtctggtcacagaaag
cattccagcaccggagatctattgagtattgaattacagcaggccaaaagtaactcttta
ttacttcagagagaagcaaatgcactagccatgcaacagaagtggaattctctagatgaa
ggcagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgaggta
aagaaagggactgattatactgaagactgtgcagacacaaagccagatcgagacatcgaa
ttggagctgtcagcccttgatacagacgaacctgatgggcaaggtgaacaaatagaagag
attctggatatacagctaggtattagttctcaagatgatcagctgctcaatggaacaact
gtagagaatgggcatccgctaaagcagcaccagaaagaatctatggaacagaagagacaa
agtttaggtgaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttct
tgcttcagtcagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcaca
tcagtcagtgttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaac
gactttttaaagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
