Tessaracoccus aquimaris: BW730_15075
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Entry
BW730_15075 CDS
T04732
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
tes
Tessaracoccus aquimaris
Pathway
tes03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BW730_15075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tes03400
]
BW730_15075
Enzymes [BR:
tes01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BW730_15075
DNA repair and recombination proteins [BR:
tes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BW730_15075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
Chordopox_A20R
Motif
Other DBs
NCBI-ProteinID:
AQP48629
UniProt:
A0A1Q2CR86
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All DBs
Position
3295366..3297528
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AA seq
720 aa
AA seq
DB search
MADVILEVPGPEPRSVKLSSPDKVLWPIDGDPVTKRDLADYLLAVAEPFLFLNGDRPMTL
QRFPDGVEGEEFFSKRPPPGAPSYLKAVMCTYPSRRRHEQLVFDEPAELAWAAQMGTITF
HPWPVRTSNLDNPDEFRIDLDPQPGRDFGDAVTAALELRTVMAESGLTAYAKTSGNRGVH
VYARIAPTHEFQDVRHGVIAIARELERRMPELVTTSWWKEERGEKVFVDFNQANRDRTIA
GAYSPRPLAWAPVSTPLSWDELVDADPRDLTVRTVPALLKRRGCPWSDIDEHVGDVSGAL
AMWQADLDNGLGELNFPPDYPKMPGEPPRVPPSKRKTDRADEDYMAPKAERDAEWGTAVV
PPFGPMLAKPVKKLPKGEYLFEPKWDGFRSLIWRSGDMVEIGSRNSRPMTRYFPELVEAI
IANFPDHSVIDGEIIMIDPESGDRLNFDALQQRIHPAASRIKKLSASMPASFVAFDLLAL
GTDNYAERPFRERREALEKALANAEPPIFLTQGTYDEALAMEWFEQFEGAGLDGVIAKPL
DEPYAEDKRVMYKLKHERTADCVVAGYRLYKDESDAIGSLLLGLYTADGVLNSVGVIGAF
PMARRKELFEELQPLVTGFDGHPWAWAKPEESLPDNRDQSIPRTPTSAAHSRWNAKKDLS
FTPLRPERVVEVRYEHMEGDRFRHTAQFLRWREDRDPESCTYEQLEEPVSYDLSKVLGAG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtgatcctcgaggtgcccggccctgagccgaggtcggtcaagctcagcagc
cctgacaaggtgctctggccgatcgacggcgaccccgtcaccaaacgtgacctcgccgac
tacctgctggcggtcgccgagccgttcctgttcctcaacggcgaccggcccatgacgctg
cagcgcttccccgacggcgtcgagggcgaggagttcttctccaagcgtccgccgcccggc
gcgcccagctacctcaaggcggtgatgtgcacctatccgtcgcggcgccgtcacgagcaa
ctcgtcttcgacgagccggccgaactggcctgggcggcgcagatgggcaccatcacgttc
cacccgtggccggtgcgcacctccaacttggacaaccccgacgagttccgcatcgacctc
gacccgcagcccggccgcgacttcggcgacgccgtcaccgccgccctcgaactgcgcacg
gtgatggccgagagcgggttgacggcctacgccaagacctccggcaaccgcggcgtccat
gtgtacgcccggatcgcgccgacgcacgagttccaagacgtccgacacggcgtcatcgcg
atcgcgcgggaacttgagcggcggatgccggaactcgtcaccacgtcgtggtggaaggag
gagcgcggcgagaaggtcttcgtcgacttcaaccaggccaaccgggatcgcaccatcgcg
ggcgcctactcgccccggccgctggcgtgggcgccggtgtcgaccccgctgagctgggac
gaactggtcgacgccgacccgcgcgacctcaccgtccgcaccgtgcccgccctgctgaag
cgccgcggctgcccctggtcggacatcgacgagcacgtcggcgacgtctccggggccctt
gcgatgtggcaggccgacctcgacaacgggctaggcgaactcaactttcccccggactat
cccaagatgccgggcgagccgccccgcgtcccgccgagcaagcgcaagacagaccgcgcc
gacgaggactacatggcgccgaaggccgagcgggacgccgagtggggcaccgccgtcgtg
ccgccgttcgggccgatgctcgctaagccagtcaagaagcttcccaagggggagtacctg
ttcgagccgaagtgggacggcttccggtcgctgatctggcgctcgggggacatggtcgag
atcgggtcgcgcaactcgcgtcccatgacccgctacttcccggaactggtcgaggcgatc
atcgcgaacttccccgaccacagcgtcatcgacggcgagatcatcatgatcgaccccgag
tcgggggaccggctcaacttcgacgccctgcagcagcggatccatccggcggcgtcgcgg
atcaagaagctcagcgcctcgatgcccgccagtttcgtggcgttcgacctgctcgcgctc
ggcaccgacaactatgcggagcggccgttccgggagcgtcgggaggcgctcgagaaggcg
ctcgcgaacgccgagccgcccatcttcctgacgcagggcacctacgacgaggcactcgcg
atggagtggttcgagcagttcgagggggctgggctcgacggggtgatcgccaagccgctg
gacgagccgtacgccgaggacaagcgggtgatgtacaagctcaagcacgagcgcacggcg
gactgcgtggtggccgggtaccggctgtacaaggacgagtcggacgcgatcgggtcgctg
ctgctggggctctacacggctgacggcgtgctgaactcggtcggcgtgatcggggccttc
ccgatggcgcgccggaaggaactgttcgaggagttgcagccgctggtgaccggcttcgat
ggccatccgtgggcttgggcgaagccggaggagtcgctgccggacaaccgggaccagtcg
atcccgcggaccccgacgtcggcggcgcactcgcggtggaacgcgaagaaggacctgtcg
ttcacgccgctgcggcccgagcgggtcgtcgaggtgcgctacgagcacatggagggcgac
cggttccgacacacggcccagttcctgcgctggcgcgaggatcgcgacccggagtcgtgc
acgtacgagcagttggaggagccggtcagctacgacctgtcgaaggtcctcggcgctggt
tga
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