Tachysurus fulvidraco (yellow catfish): 113634491
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Entry
113634491 CDS
T08119
Symbol
rbfox2
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113634491 (rbfox2)
Spliceosome [BR:
tfd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113634491 (rbfox2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
113634491
NCBI-ProteinID:
XP_026989292
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All DBs
Position
5:complement(29311117..29362903)
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AA seq
468 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLMERDNRDLDAAANQNPQAQNQSASPNPVRGMKRGDPEPDAHG
AAAAPLGDSVGAECKRPRMEGGGDMSQNNDPLTMGFHGYPSASQGSQDAMGAQEGLVPPP
YSSFPPPPPPPPQNGLPLDFGGSGIYPAGGQGQVEAPAGITNPPSAPSTLNTQLSDGSPQ
AEGQCVSGGGSGVSGAEDSADGKVTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFENSSDAEKARERLHGTIVEGRKIEVNNATARVMTNKKLVSPYANGEG
LSALPYVAGWKLSPMVGAMYGPELYAGEALVPGFPYPTAAAAAAATTAATFRGAHLRGRG
RPVYGTVRAAIPQPAIPAYPGVVYQDGFYGPADLYGGYAAYRYAQPTAVAGPTAAAAAAA
AAAYSDSYGRVYAADPYATALAAPTAAAYGVGAMATLYRGGYSRFSPY
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcgtccatcatgctgcccgttagtcggggactgatggag
cgggacaacagggacttggatgcggccgctaaccaaaaccctcaggcgcagaaccagagc
gcaagccccaacccggtgcgggggatgaagcgtggagacccggagcctgacgctcacgga
gccgctgcagcaccactcggggactcggtgggggccgagtgtaagagaccccgcatggag
ggcggaggagacatgagccagaacaatgatccactcaccatgggcttccacggatacccc
tcagccagtcagggttctcaggatgctatgggggctcaggaaggcctcgtccccccaccg
tactcgtccttccctccacctccccctccaccgccccagaacggcttgccgctggacttt
ggaggcagcggtatttaccccgcagggggccaggggcaagtggaggcaccggcagggatc
actaaccccccttcggcccctagcacactcaacacacaattatcagacggttccccccag
gcagagggccagtgtgtatccggcggcggttcaggagtatcgggggccgaagattccgca
gacgggaaagtcaccccaaaacgcctccatgtctccaacatccccttccgtttccgagac
cccgacctgcgccaaatgttcgggcaattcgggaagatcctggatgtggagatcatcttc
aacgagagaggctctaagggcttcggcttcgtgacgttcgagaacagctcagacgcagag
aaagcccgcgagaggctacacgggacgatagtggagggcaggaagatagaggtgaacaac
gctaccgctcgagtgatgaccaataagaagctggtcagtccatatgctaacggagaggga
ctcagcgctctgccttatgtagctgggtggaagctgagccccatggtgggtgcgatgtac
gggccagaactctacgcaggtgaggcgttggttccagggttcccgtaccccacggcggcg
gcggcggcagcagccaccactgctgcaaccttcaggggcgctcacctgcggggtcgcggc
cggcccgtttatggcactgtgcgcgcagccataccgcagcctgcaattccggcataccca
ggcgtggtgtaccaggatggtttctatgggcccgcagacctctatggtggttatgcggcg
tatcgctacgcccagcccaccgctgtagcaggtccgacagcagcagcggcagcggccgct
gcagcagcctatagtgacagttacggccgagtgtatgcggcagatccctacgctacagcg
ctagcagcacccacggctgcagcatacggagtgggcgcaatggccactctctatcggggc
ggatacagcaggttttctccttactaa
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