Tachysurus fulvidraco (yellow catfish): 113636625
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Entry
113636625 CDS
T08119
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113636625 (tyw1)
Enzymes [BR:
tfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
113636625 (tyw1)
Transfer RNA biogenesis [BR:
tfd03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113636625 (tyw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
FMN_red
Flavodoxin_5
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
113636625
NCBI-ProteinID:
XP_026992623
LinkDB
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Position
11:complement(5611085..5685381)
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AA seq
744 aa
AA seq
DB search
MMLHLALIANSLSFVSAAEMAGCLDIAWLYTEAFLLAAWHSRLYVYTAAALLIGLYLTVN
MTMKKKLVNPAQAKVSKSEKPKAQTPDKEKVVSVAGVRIFYGSQTGTAKGFARELAEEVQ
ALGFQSEVIDLKDYDPEDKLSDECTSKTICVFLMATYTDGKPTESAQWFYKWLEEASTDF
RYGKTYLKGMRYAVFGLGNSVYVGHYNTVGKNVDKWLWMLSAARVMSRREGDCDVVKSRN
GSIQADFQAWKVDFLWRLQALAKGEKKTCSCECEKGSCKNKKKHHEEAEGEKHSSEELFE
SSSDPESEGEEQKAHGSVIDMEDLGNVMNNMKKAKKQTEEDAAEHGRLSKLNGLKKTEGS
EEERREMITPALREALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCM
ETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKILQEALENHRNLIRQFRGVPGVRP
ERFEEGLAVKHCALSLVGEPIMYPEINSFLRLLHQCHISSFLVTNAQFPEEIRNLVPVTQ
LYVSIDASTKDSLKRIDRPLFKDFWQRFLDCLRALGEKQQRTVYRLTLVKAWNVDELKAY
ADLVALGQPDFIEVKGVTYCGESSASSLTMANVPWHEEVVHFVQQLASFLPDYDIACEHE
HSNCLLLAHHKFKVDDEWWTWIDYERFHQLIQQYDESNGVKTFTALDYMAKTPNWAVFGA
RERGFDPSDTRFLRKNKTKDISGC
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgatgttacatttagccttgatagcaaattctctgtcctttgtatccgccgctgagatg
gcagggtgtctggacattgcctggctttacaccgaagccttccttttggccgcatggcac
agcagattatacgtgtacactgcagctgcgcttcttatcgggttatatttaacagtgaat
atgaccatgaaaaagaagctggtcaaccctgcacaagccaaagtttccaaatcggagaag
ccgaaggcacaaacacctgataaagagaaggttgtcagtgttgccggtgtaaggattttc
tacgggtcacaaaccggaactgcgaagggttttgccagagagctggcagaagaggttcag
gcacttgggttccagtctgaagtgatcgacttgaaggattatgacccagaggacaagtta
tcagatgagtgcaccagtaaaaccatctgtgtgttcctcatggccacctacactgacggc
aagccgaccgagagtgcccaatggttctataaatggctggaggaggcatccactgacttc
cgctatggcaaaacctacctgaaaggaatgagatacgccgtcttcggcctggggaactcc
gtgtacgtcggtcattacaacacggttggcaaaaatgtggacaagtggctgtggatgctg
agcgcagcccgcgtcatgagccgccgtgaaggcgactgtgacgtggtgaaaagcagaaat
ggcagcatccaggctgacttccaggcgtggaaagttgatttcctgtggcgccttcaggcc
ctggcgaaaggcgagaagaagacgtgcagctgcgagtgcgaaaaaggctcttgcaagaat
aaaaagaagcaccatgaggaagcggagggcgagaagcacagctctgaggagctgtttgag
tccagcagcgatccagagtctgaaggcgaggagcagaaagctcacggctccgtcatcgac
atggaggatctcggaaacgtcatgaacaacatgaagaaagccaagaaacaaaccgaggag
gatgcagctgaacatggtagactgtccaagctgaatggattgaagaagactgaagggtct
gaggaagagaggagggagatgatcactccagcactgagagaagcactcactaaacaagga
tataaactaatcggcagtcactcaggggtcaagctttgtcgttggactaagtccatgctg
agagggagaggaggatgctacaaacacacgttttatggcatcgagtctcaccggtgtatg
gagaccacgcccagtctggcctgtgccaacaagtgtgttttttgctggagacaccacacg
aaccctgtaggaactgagtggcgttggaagatggaccctgctgagaagatcctccaggaa
gcactggaaaaccaccgcaacttgatccgccaattccgaggtgtcccaggagttcgtccg
gagcgttttgaggagggtttggcggtgaagcactgcgctctgtctctagtgggcgagcct
atcatgtacccagagatcaactctttcctgcgtctcctacaccagtgccacatctccagc
ttcctggtcaccaatgcccagtttcctgaagagatcaggaacctggtgccagtcacgcag
ctgtacgtgagcatagacgccagcaccaaggacagtctgaaacggatagaccgtcctctt
ttcaaagacttctggcagcgtttcctggactgcctcagagccctcggggagaagcaacag
cgcacagtgtaccgcctgaccctggtgaaggcctggaacgtagacgaactcaaagcctac
gctgatctcgttgccctcggccagccggacttcatcgaggtgaagggagtaacttactgt
ggcgagagctcagccagcagtctgaccatggccaacgtgccctggcatgaggaggtcgtc
cattttgtgcagcagctcgccagcttcctacccgactacgacatcgcctgcgaacatgag
cattctaactgcctgttacttgcccatcataagtttaaagtggacgacgagtggtggacg
tggatcgactacgagcgtttccatcagctcattcagcagtacgatgagagcaacggtgtc
aagaccttcactgcgctggactacatggccaagacacccaactgggccgtgttcggagct
cgagagagaggcttcgacccctcagatacacgcttcctaagaaaaaacaagaccaaagac
atctctgggtgctga
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