Tachysurus fulvidraco (yellow catfish): 113637338
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Entry
113637338 CDS
T08119
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113637338
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113637338
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
Zn_ribbon_SprT
Phage_HK97_TLTM
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
113637338
NCBI-ProteinID:
XP_026993740
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Position
11:complement(24508424..24511821)
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AA seq
544 aa
AA seq
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MAEASISVDQDQFSCPVCLDLLNDPVAIPCGHSFCKVCINGCWDQEDVKGVYSCPQCRET
FTPRPVLRRNNMLAEVVEKLKKTELQAASPAHCYAGPGDVECDFCTGRKHKAVKSCLVCQ
ASYCEDHLKPHYQSPAFKKHKLVEACAELQEKICSEHDKLVEIYCRTDQSFICYLCTMDQ
HKGHDTVSAKAERTKKQNELKEDQIKSQQRIQEKQKKVQELKQTVDVIKIHSQAAVDDGE
RIFTEMISSMEKKRSEVTELIRAQEKDEVSRAERLLNQLEQEITDLQRRVTEMEQLSHTH
DDIHFLQSFPSLCVSPGCDDSPSFTVNQHLSFDGVRKSLSDLKKRVEQICEEEFNKIRPQ
DFCYLTLDPNTVHPEFILSEKNRVVKCSKTQQRYSDHPERFDYWPQVLCKESVCGRCYWE
VEWSGDVVYISVSYIEISRKGWGYECGFGGNSQSWSLRCSSSSVSFWHNNIETELRGPSS
SRIGVYVDYSAGTLSFYSVSNTMRLLHRVHTTFTQPLYPGFRMCNISSVRFCDPKLKSVY
KNYK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccagtatttcagtagatcaggatcagttcagctgtccagtgtgtctggat
ctcctgaatgatccagtggctattccctgtggtcacagtttctgtaaggtgtgtattaat
ggctgctgggatcaggaggatgtgaagggcgtctacagctgtcctcagtgtagagagact
ttcactccaaggcctgttctacgcaggaacaacatgctggctgaagtggtggagaaactg
aagaagactgaactccaagctgcttctcctgctcactgttacgctggacctggagatgtg
gagtgtgatttctgcacagggagaaaacacaaagccgtcaagtcctgtctggtttgtcag
gcctcctattgtgaagatcatcttaaacctcactatcagtctcctgcctttaagaagcac
aagttagttgaagcctgtgcagagctccaagagaagatctgctctgaacatgacaaactg
gtggagatctactgtcgtactgaccaaagcttcatctgttacttgtgtacgatggatcaa
cacaaaggtcatgatacagtttcagctaaagcagaaagaactaaaaaacagaatgagtta
aaggaggatcagataaaatcccagcagaggatccaggagaagcagaagaaggtgcaggag
ctgaaacagactgtggacgttattaagatacattcacaggcagcagtagatgacggtgag
aggatctttactgagatgatcagctccatggagaaaaagcgctcggaggtgacggagctg
atcagagctcaggagaaagatgaagtgagtcgagctgaacgactcctgaatcaactggag
caggagattactgatcttcagaggagagtcactgagatggagcagctttcacacacacac
gatgacatccacttcctccagagtttcccgtctctctgtgtttctcctggatgtgacgac
tcacccagcttcactgtcaatcaacatctctcatttgatggagtgaggaaatctctctca
gatctgaaaaaacgagtcgaacaaatctgtgaggaggaattcaacaaaatcagaccacaa
gatttctgttatctgactctggatccaaacacagtacatcctgaattcattctgtctgag
aagaacagagtggtgaaatgcagtaagacacaacagcgatactctgatcatccagaaaga
tttgactactggcctcaggtgttgtgtaaggagagtgtgtgtggacgctgttactgggag
gtggagtggagcggtgatgttgtgtacatatcagtgtcatatatagagatcagcaggaaa
ggatggggttatgagtgtgggtttggaggcaacagtcagtcctggagtctgcggtgttct
tcttcatctgtctctttctggcacaacaacattgagactgagctccgaggtccatcatcc
tccagaataggagtgtatgtggattacagtgcaggaactctgtccttctacagcgtctct
aacaccatgaggctcctccacagagtccacaccacattcactcagcctctataccctgga
ttcaggatgtgtaatatctcatctgtgaggttttgtgatccaaaattaaaaagtgtttat
aaaaactataagtga
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