Tachysurus fulvidraco (yellow catfish): 113645201
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Entry
113645201 CDS
T08119
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113645201
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113645201
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
zf-RING_6
PRP1_N
rhaM
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
113645201
NCBI-ProteinID:
XP_027006463
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Position
11:20968142..20974963
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AA seq
560 aa
AA seq
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MAETSISVDHFSVDQFRCPVCLDLLNDPVTTPCGHSFCKMCINGCWDQEDVKGVYSCPQC
RETFTPRPVLRRNNMLAEVVEKLKKTELQVASAHCYAGPGDVECDSCIRRKRKAVNSCLV
CQASFCEDHLKPHYQSPAFKKHKLVEACAELQEMICSEHIKLMEIYNRTDQSLICVLCLM
DQHKGHDTVSAKAERTKKQNELKEDQIKSQQRIQEKQKKVQELKQTVDIIKTCSQVALDD
SERIFTEMISSMEKKRSEVTELIRAQEKAEVSRAERLLNQLEQEIADLKRRVTELEQLSH
THDDIHFLQSFPSLCVSPGCDDSLSFTVNQHLSFDGVRKSLSDLKKRVEQICEEEFNKIR
PQAAAVQMVLPSEPKSREDFLQYFCYLTLDPNTAHPQLILSEKNRVVTCRETQQRYSDHP
ERFDFYTQVLCKESVCGRCYWEVEWSGDVDISVSYKEISRKGRNACLFGCNSQSWSLQCF
FPSVFFYHYNIRTKLQGPSSSRIGVYVDHSAGTLSFYSVSDTMRLLHRVHTTFTQPLYAG
VRMLRYNSSTRFCDKIVINC
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccagtatttcagtagatcatttttctgtggatcagttcagatgtccagtg
tgtctggatctcctgaatgacccagtgactactccctgtggtcacagtttctgtaagatg
tgtattaatggctgctgggatcaggaggatgtgaagggcgtctacagctgtcctcagtgt
agagagactttcactccaaggcctgttctacgcaggaacaacatgctggctgaagtggtg
gagaaactgaagaagactgaactccaagttgcttctgctcactgttacgctggacctgga
gatgtggagtgtgattcctgcatcaggagaaaacgcaaagctgttaattcctgtctggtt
tgtcaggcctccttttgtgaagatcatcttaaacctcactatcagtctcctgcctttaag
aagcacaagttagttgaagcctgtgcagagctccaagagatgatctgctctgaacatatc
aaactgatggagatctacaatcgtactgaccaaagcctcatctgtgtcttgtgtctgatg
gatcaacacaaaggtcatgatacagtttcagctaaagcagaaagaactaaaaaacagaat
gagttaaaggaggatcagataaaatcccagcagaggatccaggagaagcagaagaaggtg
caggagctaaaacagactgtggacattattaagacatgttcacaggtagcattagatgac
agtgagaggatctttactgagatgatcagctccatggagaaaaagcgctcggaagtgacg
gagctgatcagagctcaggagaaagctgaagtgagtcgagctgaacgactcctgaatcaa
ctggagcaggagattgctgatcttaagaggagagtcactgagctggagcagctttcacac
acacacgatgacatccacttcctccagagtttcccgtctctctgtgtttctcctggatgt
gacgactcactcagcttcactgtcaatcaacatctctcatttgatggagtgaggaaatct
ctctcagatctgaaaaaacgagtcgaacaaatctgtgaggaagaattcaacaaaatcaga
ccacaagctgcagcagttcagatggttttaccttcagaaccaaagagcagagaagatttt
ctgcagtatttctgttatctgactctggatccaaacacagcacatcctcaactcattctg
tctgagaaaaacagagtggtgacatgtcgtgagacacaacagcgatactctgatcatcca
gagagatttgacttctatactcaggtgttgtgtaaggagagtgtgtgtggacgctgttac
tgggaggtggagtggagcggtgatgtggacatatcagtgtcatataaagagatcagcaga
aaaggacggaatgcttgtttgtttggatgcaacagtcagtcctggagtctgcagtgtttt
tttccctctgtctttttctatcactacaacattcggactaagctccaaggtccatcatcc
tccagaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctct
gacaccatgaggctcctccacagagtccacaccacattcactcagccgctatatgctgga
gtcaggatgttgcgttataactcatctactaggttttgtgataaaatagtaataaactgt
tag
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