Tachysurus fulvidraco (yellow catfish): 113646686
Help
Entry
113646686 CDS
T08119
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X3
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113646686 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113646686 (usp47)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113646686 (usp47)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113646686 (usp47)
Ubiquitin system [BR:
tfd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113646686 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
113646686
NCBI-ProteinID:
XP_027008907
LinkDB
All DBs
Position
2:complement(37374078..37398547)
Genome browser
AA seq
1331 aa
AA seq
DB search
MEMVPSEENQLVPKENENAAEEPRVLCIVRDTTNPKTVNERLTLNLPASTTLSKFFEDVA
HKAGYVNGTFELAWANVVALAPLDQASEMSLVESGFELGKRNFLQLTDKDGEQPQIASDE
SGTADSSGLDDSSQDRFIGPLSREGTVGCSSDYSSPSYSYSSILNKSETGYVGLVNQAMT
CYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVISIPFQLQRLFVLLQTSKKRAIETTDV
TRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGN
ESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARKG
LRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDLEDEKSPQTESCTD
SGAENEGSCHSDQMSNDFSTDDGVDEGICLDSTSTTERALKPKSSLTYELFSVMVHSGSA
AGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTHGGSSGSRGYYSSAFASSTNAYML
IYRLKDPSRNAKYLDVEDFPEHIKRLVQRERESEEQEKRQREIERNTCKIKLFCMHPVKM
VMMENKLEVHKDKTLREATEIAYKLMELEGVVPFDCCRLVKYDEFHEYLERSYEGEEDMP
MGLLLGGVKSSYMFDLLLETRRPDHVFQPYKPGEVMVKVHVVDLKSETITAPVSVRAYLN
QTITEFKQLIAQATGLFAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSDS
EDHQAAFTESLLWKLLDRHGNTIRLFVSLPEQSPGSVAHRTSCPKVSVDSEDSFGGAKSS
GQCVEAILEESTEKLKNLSFQQQQKQTSSTSESQKSSDHSDFEHLDFPQPENQLASEERS
DSDANNDRSTSSVDSDILSSSHSSDTLCNADGAPLPLANGLDSHSITSSRRSKAHEGKKE
TWDTAEEDSGTDSEYDENGKSKTQTHHLYFRAESYSQEEAAGHGANSLLVHVDKRITLAA
FKQNLEPFVGVASTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYR
VKVYQLLVNESEPCRFLLDTVFAKGMTVRQSKEVLLPQLQEQCKLELSIDRFRLRKKTWK
NPGTVFLEYHVYEEDINISSNLEVFLEVLDEPERMKSMSQLAVLTRRWCPAQMKLEPFRE
VVLESSSVDELKEKLNEISQIPLESLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVW
PLYICDDGAVVFYRDRTEEPMELSEEERNELMKKESSRLLKTGHRVSYSPRKEKALKIYL
DGGPSKDPGLD
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaggaaaaccagctcgtaccaaaagagaacgagaacgctgct
gaggaaccccgagtgttgtgtattgttcgggacaccaccaaccctaagacagtcaacgag
agactgacactcaacctcccagcttccactaccctctccaagttcttcgaagacgtcgct
cacaaagccggctacgtgaatggcacctttgagctggcatgggccaacgtggtggctttg
gctcctctggaccaagccagtgagatgtctctggtggagtctgggtttgagctaggaaag
aggaacttcctgcagctcacagacaaggatggcgagcagcctcagatagcttctgatgag
tccggaacagcagacagcagcgggctggacgacagttctcaggaccgcttcatcggaccc
ctgtcccgtgaaggtacagtaggatgtagcagtgactacagcagcccaagttactcctac
tcctccatactcaacaagtctgaaacaggatatgtgggtttggtcaatcaggccatgact
tgctatctgaacagtttactccagaccctgttcatgacgccagagtttagaaatgctctc
tacaattgggagttcgaggagtctgaggaagatccggtcatcagtatccccttccagctg
caaaggctgtttgtgctgctgcagaccagcaagaaacgagccatagagaccacggacgtg
actcggagcttcggctgggacagcagtgaagcctggcaacagcacgacgtccaggaactt
tgccgggtcatgttcgacgctttagaacagaagtggaaacaaacggagcaggctgatctc
ataaatcagctgtaccagggcaaactgaaggactatgtgcgctgcctggagtgtggcaat
gaaagctggagaatcgacacctacttggacatccctttggtcatcaggcctttcggagcc
agtcaggcgtttggcagtgtggaagaagcactgcaggccttcatccagcctgagactttg
gacggtcccaaccagtacttctgcgagcgctgcaagaagaaatgcgatgcacgcaagggt
ttgcggtttctgcactttccctacctgctgacgttgcagctgaaacgttttgacttcgac
tacaccactatgcacagaatcaagctcaacgaccgcatgaccttccctgaggaacttgac
atgagcccctttattgacctcgaggacgagaaatcccctcagacagagagctgcactgac
agcggggcagagaacgagggcagttgccacagcgaccagatgagcaacgacttctccacg
gatgacggtgtggacgagggcatctgcctggacagtacaagcaccactgagagggcactt
aagccaaagagttcactgacctatgaacttttctctgtaatggtgcattctgggagtgct
gctggtggacactactatgcctgcatcaagtctttcagcgatggtcagtggtacagcttc
aatgaccagcacgtcagcaagatcacgcaggatgacatcaggaagacacatggtggttcc
tcagggagcagaggctattactccagtgcctttgccagctccacaaacgcatacatgctc
atatatagactgaaagatccctcaaggaatgcaaagtacctcgacgtggaagacttccca
gagcacataaagcgtctcgttcagagggaacgagagtcagaggaacaggagaagagacaa
agggagattgagcgcaatacttgcaagatcaagctcttctgcatgcatcctgtcaagatg
gtcatgatggagaacaagctggaggttcacaaggacaaaacactccgagaggccacagaa
atagcatataagctgatggagctcgagggtgtagttccttttgactgttgtcgcttggtg
aagtatgacgaatttcatgaatatctggagcgctcatacgagggggaggaggacatgccc
atggggctgctccttggtggggtgaaatcctcctacatgttcgatttgctactagagacc
cggcgacccgaccatgtgttccagccttataaacctggagaagtgatggtgaaggtccat
gtggtggatctgaagagtgagaccatcactgctcctgtcagcgtccgggcatacctgaac
caaaccattacagagtttaagcaactcattgcacaagccactgggctgttcgcagaaacc
atgcgcgttgtcctggagcgctgctataatgacctccggctactgtatgtgcccaacaag
acactgaaagctgagggtttcttcaggagtaacaaggtttttgtggagagctcggactcc
gaggaccaccaggccgccttcacagaatcactcctgtggaaacttctggaccgtcatggc
aacacaatcagactgtttgtttcgctccctgagcagtcaccaggctccgtggcccacaga
actagttgccccaaagtgagcgttgactctgaggactcgtttgggggggctaaaagcagc
ggccagtgcgtagaggccatactggaggagagcacagagaagttaaagaacctttccttt
caacagcagcagaagcaaacctccagcaccagcgagagccagaagagttcagaccacagc
gattttgagcacctcgatttcccacagcctgaaaaccagctggcttcggaggaacgctcc
gactcggatgctaacaacgatcgcagcaccagctccgtggactcagacatcctgagctca
agtcacagcagtgacactttgtgcaacgccgatggcgcacctctgcctctggctaacggc
ctcgactcacacagcatcaccagcagccgccgctccaaagcccacgagggcaagaaggag
acgtgggacacagccgaggaagactctggcactgatagcgaatacgacgagaatggcaag
agtaaaactcagacacatcacctgtacttcagagctgaatcgtattctcaggaagaagct
gccggacatggagcgaacagtttacttgttcatgttgataaaaggatcacactggcagca
ttcaagcagaaccttgagccatttgttggagtagcttctacccagttcaaggtcttccga
gtctacgccaacaaccaagagtttgagagcgtacgactcaacgagaccctttcttctttc
tcggatgacaacaagatcaccattcggttaggacgagccctaaagaaaggggaatacagg
gtaaaggtgtatcagctgttagtcaacgaatcagagccttgtagattcctgttggatacc
gtgtttgctaagggcatgaccgtgaggcagtccaaagaggtgttgctgccccagctccaa
gaacagtgcaaactggagcttagcatagacaggtttcgactcaggaagaagacatggaaa
aacccaggcacggtgtttctcgagtatcacgtgtacgaggaggacataaatatctccagt
aatttggaagtcttccttgaagttcttgacgaaccggagcggatgaagtccatgtctcag
ttggccgtgctgacacggcgctggtgtccggctcagatgaagctggagcccttccgggag
gtggtgctagagagcagcagtgtagatgaactcaaggaaaagctcaatgaaataagtcag
attcctctcgagagcttggagttcgcaaagggacgaggaacatttccttgtgacatatct
gtgttggagatccatcaggatctggactggaacccaaaagtttccacacttaacgtctgg
ccgctctacatctgtgacgatggtgcagtggtgttttacagggacaggactgaggagccc
atggaactctcagaagaagagcgcaatgaactgatgaagaaagagagcagtcggctgctg
aagacgggccaccgggtcagttattctccccgcaaggaaaaagctctcaagatctaccta
gacggagggccttcgaaagacccgggcctagactga
DBGET
integrated database retrieval system
