Tachysurus fulvidraco (yellow catfish): 113647927
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Entry
113647927 CDS
T08119
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113647927
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113647927
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
PRP1_N
rhaM
DASH_Dam1
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
113647927
NCBI-ProteinID:
XP_047676521
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Position
11:complement(24296308..24358818)
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AA seq
575 aa
AA seq
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MAEASISVDHDQFSCPVCLDLLNDPVTIPCGHSFCKVCINANWDQEDVKGIYSCPQCRES
FTPRPVLRRNNMLAEVVDKLKTTELQAASPAHCYAGPGDVECDSCTGRKHKAVKSCLVCQ
ASYCEDHLKPHYQSPAFKKHKLVEACAELQEKICSEHDKLMEIYCRTDQSLICYLCTMEE
HKGHDTVSAKTERTEKQNELKEDQIKSKQRIQEKQKKVQELKQSVDIIKICSQAAVDDSE
RIFTEMISSMEKKRSEVTELIRAQEKADVSRAERLLNQLEQEIADLKRRVTELEQLSHTH
DDIHFLQSFSSLFVSPGCDDSLSFTVKQHLSFDGVRKSLSDLKKRVEQICEEEFNKIRPQ
AAAVKMILPSEPKSREDFLQSAAVKMILPSEPKSREDFLQYFCYLTLDPNTAHPDLILSE
KNRVVTRSKTQQRYSDHPERFDFWPQVLCKESVCGRCYWEVERRGVVYISVSYKEISRKG
WSYKCLFGHNSQSWSLEFYSSSVSFWNSNIYTDLRGPSPSRIGVYVDYSAGTLSFYSVSD
TMRLLHRVHTTFNQPLYAGVRMLRYNSFVRFCDPK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccagtatttcagtagatcacgatcagttcagctgtccagtttgtctggat
ctcctgaatgatccagtgactattccctgtggtcacagtttctgtaaggtgtgtattaat
gctaactgggatcaggaggatgtgaagggcatctacagctgtcctcagtgtagagagtct
ttcactccaaggcctgttctacgcaggaacaacatgctggctgaagtggtggataaactg
aagacgactgaactccaagctgcttctcctgctcactgttacgctggacctggagatgtg
gagtgtgattcctgcacagggagaaaacacaaagccgtcaagtcctgtctggtttgtcag
gcctcctattgtgaagatcatcttaaacctcactatcagtctcctgcctttaagaagcac
aagttagttgaagcctgtgcagagctccaagagaagatctgctctgaacatgacaaactg
atggagatctactgtcgtactgaccaaagcctcatctgttatttgtgtacgatggaagaa
cacaaaggtcatgatacagtttcagctaaaacagaaagaactgaaaaacagaatgagtta
aaggaggatcagataaaatccaagcagaggattcaggagaagcagaagaaggtgcaggag
ctgaaacagtctgtggacattattaagatatgttcacaggcagcagtagatgacagtgag
aggatctttactgagatgatcagctccatggaaaaaaagcgctcggaggtgacggagcta
atcagagctcaggagaaagctgatgtgagtcgagctgaacgactcctgaatcaactggag
caggagattgctgatcttaagaggagagtcactgagctggagcagctttcacacacacac
gatgacatccacttcctccagagtttctcgtctctctttgtttctcctggatgtgacgac
tcactcagcttcactgtcaagcaacatctctcatttgatggagtgaggaaatctctctca
gatctgaaaaaacgagtcgaacaaatctgtgaggaggaattcaacaaaatcagaccacaa
gctgcagcagttaagatgattttaccttcagaaccaaagagcagagaagattttctgcag
tctgcagcagttaagatgattttaccttcagaaccaaagagcagagaagattttctgcag
tatttctgttatctgactctggatccaaacacagcacatcctgatctcattctgtctgag
aagaacagagtggtgacacggagtaagacacaacagcgatactctgatcatccagaaaga
tttgacttctggcctcaggtgttgtgtaaggagagtgtgtgtggacgctgttactgggag
gtggagaggagaggtgttgtgtacatatcagtgtcatataaagagatcagcaggaaagga
tggagttataagtgtttgtttggacacaacagtcagtcttggagtctggagttttattct
tcctctgtctctttctggaacagcaatatttatactgatctacgaggtccatcaccctcc
agaataggagtgtatgtggattacagtgcaggaactctgtccttctacagcgtctcggac
accatgaggctcctccacagagtccacaccacattcaatcagcctctatatgctggagtc
aggatgttgcgttataactcatttgtgaggttttgtgatccaaaataa
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