Tachysurus fulvidraco (yellow catfish): 113648474
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Entry
113648474 CDS
T08119
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04217
Necroptosis
tfd04622
RIG-I-like receptor signaling pathway
tfd04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
113648474 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113648474 (cylda)
04625 C-type lectin receptor signaling pathway
113648474 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113648474 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113648474 (cylda)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113648474 (cylda)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C67
113648474 (cylda)
Ubiquitin system [BR:
tfd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113648474 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
113648474
NCBI-ProteinID:
XP_027011473
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All DBs
Position
1:3562309..3588535
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AA seq
953 aa
AA seq
DB search
MSSVLWSQEKGAGSPRDDWRFFMLLKECVVEKAGQKGVRVPRGSLGQVCPERTTLGRPLP
PTKGKRSLRILDQSNVVASVDERDALELDEALAELLFPITNCEERYGLLCDTARLQRARS
IRCGSRVRVQLRSGDLPLPGVVRFKGALLPDRALSGIWFGVELLEEGRGQGFTEGSYQGQ
QLFRCEDECGVFVALDKLELWEDEELEVDHLSLVDNEPDVEGDLRPLELNSRVLVQLHEG
LERGTVIFCDLLPGNETLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPIGDVI
PEYSMQDPRLSKASFTPRGSSEKSGSQSKPKSKGLGLQAASRSKSEFYYTLNGSSVDHPT
QSKSKSTWYIDEVGEDPAKSLTETPPDFNQASPPPRTPPTAPSLSSDNKFHSLPFSLSRK
SGPNGSMSHGPLSLSVQSVMGEQQEAPPPPTAPSPRPPSPPKGQPGLEVGSLVEVKENPP
LCGVIRWVGLPPGLLEPLAGLELEEESLGCTDGTFKGTRYFTCPPKKALFVKLKCCRPDS
RFPSQHHSPNPIERCNSIAFGGYLSEVVNENTPPRTESDGLDVMVGKKKGIQGHYNSCYL
DSTLFCLFSFSSVLDTVLLRPKSKTDVEYYLETQELLRTEIVNPLRIHGYVCATKIMKLR
RILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMDKKD
KVLVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMYNKIFPSLELDITDLLED
TPRECRICGGLALYECRECYEDSDITAGKIKQFCEKCNTQVHLHPRRKSHRYNKLSLPKE
LQEGTWRQAAFPRQQMELFAVLCIETSHYVAFVKYGSAASSWLFFDSMADRDGGQNGFNI
PQVSPCPEVGAYLKMTPEELHALDPKNIQGYARRLLCDAYMCMYQSPTMSLYK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggtgctgtggagtcaggagaaaggggcgggcagcccgcgagatgactggcgc
ttcttcatgctgctgaaggaatgtgtggtggagaaggccgggcagaagggggtgcgtgtg
ccgcgtgggagtctaggtcaagtctgtcccgagcgcaccaccctgggccgcccgttgccc
cccaccaagggcaagcgcagcctacgaattctggatcagagcaacgtggtggccagcgta
gatgagcgagatgcactggagctggacgaggctctggccgagctgctctttcccatcacc
aactgtgaggagcgctacgggctgctgtgcgacacggcgaggcttcagcgcgctcgctcc
atacgctgcggctccagggtgcgagtccagctgcgctccggtgacctgccgttacctgga
gtcgtcagatttaaaggagctctgctgcctgaccgagccctgtcggggatctggttcggt
gttgagctgctggaggagggtcgtggtcagggttttacagagggctcgtatcagggtcag
cagctgttccgctgtgaagatgagtgcggcgtgtttgttgctctagataaactggagctc
tgggaggatgaggagcttgaggtggaccacctgagcctggtggacaacgagccggacgtg
gaaggagatctccggcctctggagctcaactctcgcgtcctggttcaactacacgagggc
cttgaacgtggcactgtcatcttctgcgaccttttacccggcaacgagaccctcggctat
tacgtcggagtcgatatggacaatcccatcggagactgggacggcgtgatcgacgggaaa
ctgctgtgtaatttcgccagcctcgagcacacccgtctcgtgcccatcggtgatgtcatt
ccagaatactccatgcaggacccgaggctgtccaaagccagctttactcccagagggagc
agtgagaagtctggcagtcagagcaaaccaaagagcaaagggttaggtctgcaggctgcc
agcagaagcaagtctgagttttattatacgttaaacggcagctctgtcgatcacccgacc
cagtccaaatccaaaagcacgtggtacatagacgaagtgggtgaagacccagctaagtcc
ctgacggaaacgccccccgacttcaaccaggcgtcaccgcctccccgcaccccgcctact
gccccgtcactgtccagtgacaacaagtttcactcgctgcccttcagcctgagtcgcaag
agcggccccaatgggagcatgagccatgggccgctctcgctatccgtccagtcggtgatg
ggtgagcagcaggaggctccgcctccaccaacagctccctctccgaggcctccgtcgcct
cctaaaggtcagccggggttagaggttgggtcactggtagaggtgaaggagaatccgccc
ctttgcggggtgatacgctgggtgggcctgccacctggactactggagcctcttgcagga
ctggaactggaagaggagtctctaggatgcactgacggtacttttaaaggcacacgttac
tttacttgtcctccaaagaaagctttgtttgtgaaactgaaatgctgccgtccagattca
cgcttcccttcccagcaccattcacccaatccaatcgaacgctgtaactctatagcgttt
ggtggttacctgagtgaggtagtaaatgagaacactcctcctcgtacagagagtgatggc
ctagatgtgatggtcggcaagaagaaaggcattcaaggtcactacaactcctgctacttg
gattccacgcttttctgtctattttcatttagctcggtgttggacacggtgttactgagg
ccgaagtctaagactgatgtagaatactacctggagacacaggagctgttacgcactgag
atagtcaacccactgcggattcatggttatgtctgcgcgactaagatcatgaagttgcgg
agaattctagaaaaggtggaggctgcttcgggattcacgtctgaggagaaagatccggaa
gagtttctcaacatactgtttcaccacatcctgagggtcgaccctctgcttaagcttcgc
tctgctggccaaaaagttcaggactgttacttctaccagatcttcatggataagaaagat
aaagtgcttgtgccgactagccaacaactgctagagtggtccttcatcaacagtgacctc
aagtttgctgaggctccctcgtgtctcatcatccagatgcctcgctttgggaaggacttt
aagatgtataataagattttcccgtctctggagctggacatcacggatcttctggaagac
acacccagagagtgtcgtatctgtggtggtttagctctgtatgagtgcagggagtgttac
gaagattctgacatcacagcaggaaagattaagcagttctgtgaaaagtgcaatacacag
gtgcatctgcacccacggcgtaagagtcatcgttacaacaaactctcgttacctaaagag
cttcaggagggcacatggagacaggctgctttcccccgtcagcagatggagctgttcgcc
gtgctctgcatcgaaaccagccactatgtggctttcgttaagtacggctcagcggcgtcc
tcctggctcttcttcgacagcatggccgacagagacggtggtcagaacggttttaacatc
ccgcaggtgtccccgtgtcctgaggtgggcgcgtacctgaaaatgacccccgaagagctc
cacgcgctcgaccctaaaaacatccagggttacgcgcgccgcctgctctgcgacgcttac
atgtgcatgtaccagagccctacgatgagcctgtataaataa
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