Tachysurus fulvidraco (yellow catfish): 113650910
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Entry
113650910 CDS
T08119
Name
(RefSeq) peroxisome proliferator-activated receptor gamma-like
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03320
PPAR signaling pathway
tfd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113650910
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
113650910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113650910
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tfd03310
]
113650910
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
113650910
Nuclear receptors [BR:
tfd03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
113650910
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
113650910
NCBI-ProteinID:
XP_027015261
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Position
23:21590360..21596869
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AA seq
436 aa
AA seq
DB search
MDETRMNSFDVTFPTKPAFAPSTSSDDSSSRYKLGMDANTPGLGGEKEKLSSHCKLHTDR
SDAVLALECQICGDRASGYHYGVYACEGCKGFFRRTVQLKLRYKLCSQKCQVHKKSRNKC
QFCRFKKCVLAGMSYTAIRFGRTPLSERERRITEFHTLEHQLEPKSEKQQELSKNLYDSY
LKIFPMTRSKAKAILSGKDGENTLFVIHDMKSLLDGEEFLKRKLSSVSPLFPAVELELSM
FRRVQYGSAEAVRRLTQFAKSIPGFGDLELSDQITMLKYSALEVNIINLSHLTNKDGVLM
AEGCVFMTREFIKSLRKPFCDMIETKFDFLVKFRALELEDCDLALFIAAVILCGDRPGLV
NPKAIEALQDEVLQALELQLKVLHPESPRLFAKLLQMTTDLQPLVAEHVRNIHLLKKREL
DLCLHPLLLEIMQDLY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaacgaggatgaactctttcgatgtgacgtttccaacaaaacctgccttcgct
ccgagtacatccagtgacgattcgagctccagatacaaactcggcatggatgcaaacaca
ccgggtctcggcggtgagaaggaaaaactcagctcacactgcaaactacacactgacagg
agcgacgcggtgttagccctggagtgtcagatatgtggggatcgagcttcagggtatcat
tacggcgtgtacgcatgtgaaggatgtaagggtttcttccggagaaccgtgcaactaaag
ctgaggtataaactctgcagccagaagtgtcaagtccacaaaaaaagccggaacaagtgt
cagttctgccggtttaagaagtgtgttttggcaggaatgtcttacaccgcaatccggttc
gggagaacacctctgagcgagcgagagaggaggatcacggagttccacacgctagaacat
cagctggaacccaagtcagaaaaacaacaagagctcagcaagaatttatacgattcctac
ctcaaaatcttcccaatgacacgaagcaaagccaaagcgattttatcagggaaagatgga
gaaaacacgttgttcgtcatccacgatatgaagtccctgttggacggagaggagttcctg
aagcggaagctgtcgtccgtgtcgcctctgttccctgccgtcgagctggagctgtccatg
ttccgccgagtacagtacggctcggccgaggccgtacgcagactcacgcagttcgctaag
agcatcccaggcttcggtgacctggagctgagcgatcagatcaccatgctgaagtacagc
gcccttgaggtgaacatcatcaacctgagccacctcaccaacaaggacggcgtgctgatg
gccgagggatgtgtcttcatgacccgagagttcatcaagagtcttcgcaaacccttctgt
gacatgatagagaccaagtttgacttcctggttaaatttagagcgctcgagctggaagac
tgtgacctggcactcttcatcgctgcagtgatcctgtgtggtgatcgacccggtttggtg
aaccccaaagccatcgaagcgctccaggatgaggttcttcaggctctggagctccagctg
aaggttctccatcctgagtctcctcgcctctttgccaaactgctgcagatgacgacagac
cttcagccactggtggcagaacacgtacgcaacattcatctgctgaagaagagagagttg
gacctgtgtcttcacccgctcttactggagatcatgcaggacctctactag
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