Tachysurus fulvidraco (yellow catfish): 113655122
Help
Entry
113655122 CDS
T08119
Symbol
ftr82
Name
(RefSeq) finTRIM family, member 82
KO
K12006
tripartite motif-containing protein 16
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113655122 (ftr82)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113655122 (ftr82)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
ALS2CR8
DUF4407
Motif
Other DBs
NCBI-GeneID:
113655122
NCBI-ProteinID:
XP_027021237
LinkDB
All DBs
Position
26:7416029..7422037
Genome browser
AA seq
576 aa
AA seq
DB search
MAEPVSPDYFSCHLCASLLRDPVAIPCGHSFCMDCISGYWNDADYTGIYICPQCRITFTQ
RPVLRPNATLSKVAEKIKKTGLNLNLVPPSNGSIAGPTDVPCDFCSGKKLKAVKSCLNCL
ASYCEKHLKPHYESATFKRHKLVDELGNLDRKICPQHQKSLELFCRTDQMCICAICTVSE
HKGHDIVSAEAERSEKQKLLGVSQAEIKQKCQQRTKELEELKTAVDSLKSSAQRAMTESK
KMFDEMLTSIERMRSEVIKLININEKAAFSQAEGLMERLEQEIEELKKKETGLKQLYSTE
DHIHFLQNFNYLCTPTDDGFIPKVSLNPDFSFSAARKAVAEIKEKLEELGREELLKVSKS
VNEVPAYTLENRSVREKSSRVKEIQTVDSAPPSQPRSRSEFLKYFCQLRLDPSTAYKELY
LSDGNKKVTRTRNLQPYSDNAERFDTFAQVLCREALSGGRFYWEIEWNGEFSVGVAYRGI
SRKGKGPLCLLGYNDKSWSLLCSDTGYSAWHNRVDKTISAPHSPRIGVYLDHSAGVLAFY
SIGETMTCLHRFETTFSEPLYPGFGVGTSVKICQLK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggctgagccggtgtctccagattacttcagctgccacctgtgcgcgagtctcctgagg
gatcctgtggctatcccctgtggccacagcttctgtatggactgcattagtggctactgg
aatgacgctgactacaccgggatttacatctgtcctcagtgcagaatcactttcacccag
agacctgtgctcagacccaatgcaaccctctccaaagtggctgagaagatcaagaagaca
ggcctgaacctcaacctggtgcctccaagcaacgggagcattgctggaccgactgatgtg
ccttgtgacttctgctctggaaagaagctcaaagctgttaagtcctgcctcaactgcttg
gcctcatactgtgagaaacatctcaagcctcactacgagtcggctactttcaagagacac
aaactggtggacgagctaggaaacttagacagaaagatctgcccgcagcaccagaagagc
ttggagctcttttgccgtaccgaccagatgtgtatctgcgctatctgcactgtcagcgag
cacaaaggtcatgatattgtctcagcagaggcagagagaagtgagaagcagaaacttctt
ggagtgtcccaagctgagatcaaacaaaaatgtcagcagaggaccaaagagctggaggaa
ctaaagacggctgttgactcactgaagagctcagctcaaagggccatgacggagagtaag
aagatgtttgacgagatgctcacttccatcgagaggatgaggtcggaggtcatcaagctg
atcaacatcaatgagaaagctgcgttcagccaggctgagggactgatggagcgcttggag
caggagattgaggaactgaagaagaaggagactggattaaagcagctctacagtactgag
gaccacatccacttcttacagaatttcaactatctctgtacaccaactgatgatggattc
attcctaaagtgtctctgaacccagatttttcattcagtgccgcaaggaaagctgtcgca
gagatcaaggaaaagcttgaagaactgggcagagaggaactgctgaaggtctcaaaatca
gtgaatgaagtacctgcttatacactagagaaccgtagcgttcgagagaaaagcagccga
gtcaaagaaatccaaactgtggacagtgcccctccatcacagcccaggagcaggtctgag
ttcttaaaatacttctgtcagctccgtctggaccccagcacagcttataaagagctctac
ctatcagacggaaacaagaaggtgactcgaacccgcaacctgcagccctactctgataat
gcagagcggtttgacaccttcgcccaggtgctgtgtcgtgaggctctgtctggtggccgc
ttctattgggagatagagtggaatggagaattttctgttggggtggcctaccgaggcatc
agccgcaaaggcaagggtcccctgtgtttgctggggtacaatgataaatcctggagtctc
ctctgctccgacacgggctattctgcctggcataaccgggtggacaaaaccatcagtgcc
ccacattctccacggataggggtctaccttgaccacagcgcaggggtgctggctttctac
agcatcggcgagaccatgacatgccttcatcgcttcgagaccaccttcagtgaacccctt
tatcctgggtttggggttggaacctcggttaaaatctgtcagctaaaatga
DBGET
integrated database retrieval system