Tachysurus fulvidraco (yellow catfish): 113656121
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Entry
113656121 CDS
T08119
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113656121 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113656121 (vti1b)
Membrane trafficking [BR:
tfd04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
113656121 (vti1b)
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GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Fusion_gly
Arm-DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
113656121
NCBI-ProteinID:
XP_027022966
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Position
4:588242..594695
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AA seq
232 aa
AA seq
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MLKIDRMSSEDFEKLHEMYLSVYDELKLRCDRVSRSQGEEKKKLLRGFDERHGEAQELLQ
EMEQELLSAPSTFKNSMSSKVRLYHRDLGKLQRLAHASDTGFGFPTRTGDGGYGVYAAQN
EHTSEQQAQRTLLIQGSESLNNATQSIARSQRIAVESEHIGTDIIEELGQQREQLDRTRD
RLVHTGENLSRSRKILRTMSRRVMTNKLLLGIIIIMEVAILGAVVYLKFFRH
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaatcgacagaatgtcttcggaggactttgagaagcttcatgagatgtactta
agtgtgtatgacgagctgaagctgaggtgtgaccgagtcagtcgctctcagggagaggag
aagaagaaactgctgcgagggtttgatgagcgccacggagaagcacaggagctgctgcag
gagatggagcaggagcttctcagcgccccgtccaccttcaagaactccatgtcctccaaa
gtgcgtctgtaccacagagacctggggaagctgcagcgcctggcgcacgcctcggacacc
gggttcggcttccccacgcggacgggagacggcgggtacggcgtatacgccgctcagaac
gaacacactagcgagcagcaggctcagcgaacgttactgatccagggctccgagtctctg
aacaacgccacacagagcatcgcacgcagccagcgcatcgccgtggagagcgaacacatc
ggcacagacatcatcgaggagctcggacagcagagagagcagctggaccgcaccagagac
agactggttcacacaggagagaatctgagccgcagcaggaagatcttacgcaccatgtca
cgcagagtgatgaccaacaagctgctgctggggatcatcatcatcatggaggtggccata
ctgggagctgtggtctacctcaagttcttccggcactga
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