Tachysurus fulvidraco (yellow catfish): 113658609
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Entry
113658609 CDS
T08119
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113658609
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113658609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_10
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
Zn_ribbon_SprT
PRP1_N
Motif
Other DBs
NCBI-GeneID:
113658609
NCBI-ProteinID:
XP_027026942
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Position
9:complement(26899932..26912020)
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AA seq
593 aa
AA seq
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MKVRVSLSCILSVCEFRKMAEANISVDQDQFSCSVCLDLLKDPVTPSCGHSFCKVCINGC
WDQEDQKDVYSCPQCRDTFTPRPVLHRNNILAEMVEKLKKTEVQAASPAHCYAGPGDVEC
DFCTGRKHKAIKSCLDCQASFCETHLKPHLEIPVLKKHKLVKVSGNLQKKICSEHDKVLE
IFCRSDQSFICYLCMMDKHRGHDTVTAADERIEKQNELQEEQLKFQQRLQEKLKKVQELK
QAVNTIKLSAKIAVGDSERIFTELISSMEKKHSKVTEMIRAQEKAELSRAERLLEQLEQE
INDLQRRVTEMEKLSHTHDHIHFLQEIKALVSGRRSPPYVRPDFQSDLCEDSSIITFNQQ
LSFQRVRKSLSDLKKRLEEICQEEFIKIPEHVEDIQILLSEPKSRQEFLKYFCDLTLDPN
TVNHHLILSEKNRAVTYSETMQRYSDHPERFDCYSQVLSKESVCGRCYWEVEWSSQRYVL
ISVSYKVISRKGRGIECWIGGNNQSWSLECSPTSLFFYNNNIKTDLRVPSPSRIGVYVDH
SAGILSFYSVSDTMKLLHRVHTTFTQPLYAGFWLYWDVLCKSESTVRLCDRKK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcagagtttccctctcatgtattctgtcagtgtgtgagttcaggaaaatggct
gaggcgaatatttcagtagatcaggatcagttcagctgttcagtgtgtctggatctcctg
aaggatccggtgactccctcttgtggccacagtttctgtaaggtgtgtattaatggctgc
tgggatcaggaggatcagaaggacgtctacagctgtcctcagtgcagagacactttcacc
ccaaggcctgttctacacagaaacaacattctggctgaaatggtggagaaactgaagaag
actgaagttcaagctgcttctcctgctcactgttacgctggacctggagatgtggagtgt
gatttctgcaccgggagaaaacacaaagccatcaagtcctgtctggattgtcaggcctca
ttttgtgaaactcatctcaaacctcatcttgaaattcctgttttgaaaaagcacaagtta
gtgaaagtctctggaaatctacaaaagaagatctgctctgaacatgataaagtgctggag
atcttctgtcgttctgaccaaagctttatctgttatctgtgtatgatggacaaacacaga
ggtcatgacacagtcacagctgcggatgaaagaattgaaaaacagaatgagctacaggag
gagcagctgaaattccagcagagactccaggagaagctgaagaaggtgcaggagctgaaa
caggctgtgaacactataaagctcagtgcaaagatagcagtgggggacagtgagagaatc
tttactgagctgatcagctccatggagaaaaagcactcaaaggtgacggagatgatcaga
gctcaggagaaggctgaactgagtcgagctgaacgactcctggagcaactggagcaggag
attaatgatcttcagaggagagtcactgagatggagaagctttcacacacacacgatcac
atccatttcctccaggaaataaaggctttagtctctggtcgtcgctctcctccatatgtc
agaccagattttcagtctgatctctgtgaggattcatccatcatcactttcaatcaacag
ctctcatttcagagagtgaggaaatctctctctgatctgaaaaagagactcgaggaaatc
tgccaggaggaattcatcaaaatccctgaacatgttgaggacattcagattttactttca
gaaccaaagagcagacaagagtttctaaaatatttctgtgatctgactctggatcccaac
acagtaaatcatcacctcattctgtctgagaagaacagagcagttacgtacagtgaaacg
atgcagcgatactctgatcatccagagagatttgactgctacagtcaggttctgagtaag
gagagtgtgtgtggacgctgttactgggaagtggagtggagcagtcagagatacgtgtta
atatcagtctcatataaagtcatcagcaggaaaggtcggggtattgagtgctggattgga
ggcaacaatcagtcctggagtctggaatgttctcctacttctctcttcttctataacaac
aacattaagactgatctcagagttccatcaccctccagaataggagtgtatgtggatcac
agtgcaggaattctgtccttctacagtgtctctgacaccatgaagctcctccacagagtc
cacaccacattcactcagcctctatacgctgggttctggctctactgggatgttttgtgt
aaatcagaatcaactgtgaggttgtgtgatcgaaaaaaataa
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