Tachysurus fulvidraco (yellow catfish): 113658611
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Entry
113658611 CDS
T08119
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113658611
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113658611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_6
zf-RING_10
Zn_ribbon_SprT
U-box
Spc29
DUF6591
DUF4407
Motif
Other DBs
NCBI-GeneID:
113658611
NCBI-ProteinID:
XP_047674364
LinkDB
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Position
9:26594400..26597372
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AA seq
561 aa
AA seq
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MAEASISVDQLSVDQFICSVCLDLLKDPVTLSCGHSFCKVCINGCWDQEDQKDVYSCPQC
RDTFTPRPVLRRNNMLAEVVEKLKKKTEVQAASPDHCYAGPGDVECDFCTGRKHKAVKSC
LVCVASFCETHLKPHYQVPSWKKHKLVVASGNLQEKICSEHDKVLEIFCRSDQSFICYLC
MTDEHKSHDTVSVKAYRSEKENELQEEQLKFQQRLQEKQKKVQELKQAVNTIKLSAQTAV
EDNERIFTELISFMEKKRSEVTEMIRAQEKAELSRAERLLEQLEQEIDDLQRRVTEMEKL
SHTHDHIHFLQSFQSLRVSSGHDDTSSITVSQHLSFDGVKKSLSDLKKRLVEIFQEEFFN
ISGRAAELQIILPSEPKSRDDFLHYFCSLTLDPNTTHRHLILSEKNRAVTLSTREQQYSD
HPERFNSRWQVLCKESVCGRCYWEVEWSGGGVSISVSYKDIRRKGGDNECWFGRNKQSWC
LECSPSSSLSFYHNNIKTDLRVPSPPRIGVYVDHSAGTLSFYSVSDTMKLLHRVHTTFTQ
PLYAGFELYYYGTSVKLCDPK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcgagtatttcagtagatcagctttcagtggatcagttcatctgttcagtg
tgtctggatctcctgaaggatccggtgactctctcctgtggtcacagtttctgtaaggtg
tgtattaatggctgctgggatcaggaggatcagaaggacgtctacagctgtcctcagtgc
agagacactttcacaccaaggcctgttctacgcagaaacaacatgctggctgaagtggtg
gagaaactgaagaagaagactgaagttcaagctgcttctcctgatcactgttacgctgga
cctggagatgtggagtgtgatttctgcaccgggagaaaacacaaagccgtcaagtcctgt
ctggtgtgtgtggcttcgttttgtgaaactcatctcaaacctcactatcaagttccttca
tggaaaaagcacaagttagtcgtagcttctggaaatctacaagagaagatctgctctgaa
catgataaagtgctggagatcttctgtcgttctgaccaaagcttcatctgttatctgtgt
atgacggatgaacataaaagccacgacaccgtctcagttaaagcttacagaagtgagaaa
gagaatgagctacaggaggagcagctgaaattccagcagagactccaggagaagcagaag
aaggtgcaggagctgaaacaggctgtgaacactataaagctcagtgcacagacagcagtg
gaggacaatgagaggatctttactgagctgatcagcttcatggagaaaaagcgctcggag
gtgacggagatgatcagagctcaggagaaggctgaactgagtcgagctgaacgactcctg
gagcaactggagcaggagattgatgatcttcagaggagagtcactgagatggagaagctt
tcacacacacatgatcacatccatttcctccagagtttccagtctcttcgtgtctcttct
ggacatgacgacacatccagcatcactgtcagtcaacatctctcatttgatggagtgaag
aaatctctctctgacctgaaaaagagactcgtggaaatcttccaggaggaattcttcaac
atctctggacgtgctgcagaacttcagataattttaccctcagaaccaaagagtagagat
gattttctgcactatttctgttctctgactctggatcccaacacgacacatcgtcacctc
attctgtctgagaagaacagagcagtgacactcagtacgagagagcagcagtactctgat
catccagagagatttaactccaggtggcaggtgttgtgtaaggagagtgtgtgtggacgc
tgttactgggaggtggagtggagcggtggtggtgtgtccatatcagtctcatataaagac
atcaggcggaaaggaggtgataatgagtgctggtttggacgcaacaaacagtcctggtgt
ctggaatgttctccttcttcttctctctctttctatcacaacaacattaagactgatctc
agagttccatcaccccccagaataggagtgtatgtggatcacagtgcaggaactctgtcc
ttctacagcgtctctgacaccatgaagctcctccacagagtccacaccacattcactcag
cctctatacgctgggttcgagctctactattatggaacatctgtaaaattatgtgatcca
aaataa
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