Tachysurus fulvidraco (yellow catfish): 113660566
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Entry
113660566 CDS
T08119
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113660566
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113660566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
PRP1_N
zf-RING_6
zf-RING_2
zf-RING_5
Zn_ribbon_SprT
zf-RING_10
U-box
ALS2CR8
MAD
DUF6591
Exonuc_VII_L
Peptidase_S46
Fib_alpha
DUF5446
Motif
Other DBs
NCBI-GeneID:
113660566
NCBI-ProteinID:
XP_047674370
LinkDB
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Position
9:complement(26480787..26483992)
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AA seq
560 aa
AA seq
DB search
MAEASISVDHDQFICSVCLDLLKDPVTLSCGHSFCKVCINDCWDQEDQKDVYSCPQCRDT
FTPRPVLRRNNMLAEVVEKLKKTEVQAASPDHCYAGPGDVECDFCTGRKHKAVKSCQVCV
ASFCETHLKPHYQIHGLKKHKLVEASGNLQEKICSEHDKVLEIFCRSDQSFICYLCMTDE
HRGHDTVTASAERTEKREEQLKFQQRLQEKQKKVQELKQAVNTIKLSTQTAVEDNERIFT
ELISFMEKKRSEVTEMIRAQEKAELSRAERLLEQLEQEINDLQRRVTEMEKLSHTHDDIH
FLQALVSGHCFLPYNRPDFQSDLCEDSSSITFSQHLSFQRVRKSFSDLKKRLEEICHEEF
INIPEDAAGLQIILPSEPKSRDDFLHYFCDLTLDPNTVNYHLILSEKNRAVSSSERKQIY
PFHPERFDCYSQVLCKETVCGRCYWEVEWSSQGCVEISVSYKNIRRKGLGDKCVFGLNKH
SWSLECSSSSLSFSHNNIKTEFGVPSPSRIGVHVDHSAGTLSFYSVSDTMKLLHRVHTTF
TQPLYAGFWLPCYGSTIRFK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcgagtatttcagtagatcatgatcagttcatctgttcagtgtgtctggat
ctcctgaaggatccggtgactctctcctgtggtcacagtttctgtaaggtgtgtattaat
gactgctgggatcaggaggatcagaaggacgtctacagctgtcctcagtgcagagacact
ttcacaccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactg
aagaagactgaagttcaagctgcttctcctgatcactgttacgctggacctggagatgtg
gagtgtgatttctgcaccgggagaaaacacaaagccgtcaagtcctgtcaggtgtgtgtg
gcttcgttttgtgaaactcatctcaaacctcactatcaaattcatggattaaaaaagcac
aagttagtggaagcttctggaaatctacaagagaagatctgctctgaacatgataaagtg
ctggagatcttctgtcgttctgaccaaagcttcatctgttatctgtgtatgacggatgaa
cacagaggtcatgacacagtcacagcttcagcagaaagaactgaaaaacgagaggagcag
ctgaaattccagcagagactccaggagaagcagaagaaggtgcaggagctgaaacaggct
gtgaacactataaagctcagtacacagacagcagtggaggacaatgagaggatctttact
gagctgatcagcttcatggagaaaaagcgctcggaggtgacggagatgatcagagctcag
gagaaggctgaactgagtcgagctgaacgactcctggagcaactggagcaggagattaat
gatcttcagaggagagtcactgagatggagaagctttcacacacacatgatgacatccat
ttcctccaggctttagtctctggtcattgctttcttccatacaatagaccagattttcag
tctgatctctgtgaggattcgtccagcatcactttcagtcaacatctctcatttcagaga
gtgaggaaatctttctctgatctgaaaaagagacttgaggaaatctgccatgaggaattc
atcaacatccctgaagatgctgcaggacttcagataattttaccctcagaaccaaagagt
agagatgattttctgcactatttctgtgatctgactctggatcccaacacagtaaattat
cacctcattctgtctgagaagaatagagcggtgtcgagcagtgagagaaagcagatatac
ccttttcatccagagagatttgactgctacagtcaggtgttgtgtaaggagactgtgtgt
ggacgctgttactgggaggtggagtggagcagtcagggatgtgtagaaatatcagtctca
tataaaaacatcagaaggaaaggactgggtgataagtgtgtgtttggactcaataaacat
tcgtggagtctggaatgttcttcttcttctctctctttctctcacaacaacattaagacc
gagttcggtgttccttctccgtccagaataggagtgcatgtggatcacagtgcaggaact
ctgtccttctacagcgtctctgacaccatgaagctcctccacagagtccacaccacattc
actcagcctctatacgctgggttctggctgccttgttatgggtcaactatcagattcaaa
tga
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