Tachysurus fulvidraco (yellow catfish): 113661207
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Entry
113661207 CDS
T08119
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113661207 (rnf6)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113661207 (rnf6)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113661207 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_4
zf-RING-like
MAJIN
zf-P11
zf-RING_16
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
113661207
NCBI-ProteinID:
XP_027031008
LinkDB
All DBs
Position
25:15221929..15227877
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AA seq
685 aa
AA seq
DB search
MDPPGGRDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEITAEELRQRLD
GAKERVSSQPRPESRPQNSEAGQEGSSAAAEPGAESTNGDSLLEWLNTFRRTGNATRSGQ
SGNQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDASEPVELPVSQRASASIRTPS
RPAPYSTQHPTPYSTTRPTLGRRAQARRTRSSTTPPITSPLISQAPYTSLRRNLALPQPA
PLPPAPPPPPLPPPPSSQATPTSLPQEQDSTHSVQGQVQAQLPSLSNEEVQVANDAPDCP
VAVSQASAPGAAASREARRTRSRGRVRRIALSRSSRRSRSPLDRNSTRSSSPTPSNSAPA
VESTGSTAAAAAVEIVEIPAEATAPVESAPEMGTEEGETPVSGAAGSVRRHPTIMLDLQV
RRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIP
LRRISETGLGEPSSTALRSILRQIMTGFGELSSLMETEADPEGSTPGQNVGVSAAALTQR
AQGGEATTGNAVTESGRESGVVGEAGQARVGSTGRDTNNLVENGTLPILRLAHFFLLNDE
EDNEHPRGLTKEQIDNLATRTYGQASLEGEQGRACSVCINEYAQGNKLRSLPCAHEFHIH
CIDRWLSENNTCPICRQPILSSHQD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcccggcgggcgagacgaacgtcgccgtcaggccgagcgtcttcggcgggag
gaggcgtactaccacttcatcaatgagctgagcgaggaggagtatcggctcatgagagac
agcaacctgctgggcacgccgggtgaaatcacagctgaggagttgagacagcgcctggat
ggagcaaaggagcgggtgtcctcgcagcctcgccctgaatcacgcccacaaaacagtgag
gctggccaggagggaagcagcgctgctgctgagccgggtgccgagagcactaacggagac
tctctgctggagtggctgaacacatttcgacgtacaggcaatgccacccgcagtggccag
agcggcaaccagacgtggcgtgctgtcagccgcacaaacccgaacagtggcgagtttcgc
ttcagcctggaaatcaacatcaatcacgagcagcccgagccgggggagcacagtgatgct
tctgaacccgttgagcttcctgtttcacagcgggcctctgcatctatacgcactccctca
aggcctgcaccatattccactcagcaccccaccccttattctacaaccaggccaactctg
gggcggcgggctcaggcacggcgcactcgcagtagcactaccccacccataacctcacct
ctgatctcgcaggcaccgtatacgagtttgaggaggaaccttgctttgcctcagccagca
ccacttcctcctgctcctccgcctcctcctctccctcctcccccttcttcacaggccaca
cccacatccttgcctcaagagcaggatagcactcacagtgtgcagggacaagtacaggcg
cagcttccttcacttagtaacgaggaggtgcaggtagctaacgatgctccagactgtcca
gtagctgtgtctcaggccagtgcgccgggggcggcagctagccgtgaggcacgcagaact
cgttcacgtggccgggtccgccggatagctctgtcccggtcttcacgacgtagccgctca
cctctggatagaaactccacccgaagctctagcccaacccccagcaacagtgctcctgct
gtagagtccactggaagcactgctgctgctgctgctgtggagatagtggaaattcctgct
gaggcaactgcacccgtagaatctgcccctgaaatgggcaccgaggaaggtgagacgcct
gtgtcaggtgcagcaggcagcgttcgccggcacccgactatcatgttggatttgcaggtg
cgccgaatccggccaggtgagaatcgagaccgggatagcattgccagccgaacacggtct
cgtgcccgtgccgctgaaaacacggttacctttgagagcgacagcggaggtttcagacgg
accatctcacgctcggaacgtgccggcatccgcacatacgtaagcactatccgcattcca
ctgcgccgcatctctgagacaggattgggtgaaccgagttccacggcgctgcgctccatc
ctgcggcagatcatgacaggcttcggagagctcagttctttaatggagacagaggccgac
ccagaaggctccacacccggacagaacgtgggcgtcagtgctgcagctctgacacagcgt
gcgcagggtggtgaagccacaacaggaaatgctgtaacagagtcgggacgagagagtgga
gtagtgggtgaggctggccaggcgagggtgggaagcaccgggcgggacacaaataacctg
gttgagaatggcaccttgcccatcctgcggctggcgcactttttcctgctgaacgacgag
gaggataacgagcacccgcgcggtctcaccaaagagcaaatcgacaatctggccacacgc
acctatggccaggctagcctggagggcgagcagggacgcgcctgcagcgtgtgcatcaac
gaatacgcgcagggcaacaagcttcgcagcctcccctgtgcacacgagttccacatccac
tgcatcgaccgctggctctcagagaacaacacgtgccccatctgcaggcagcccattctg
tccagccatcaggactga
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