Tachysurus fulvidraco (yellow catfish): 113661698
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Entry
113661698 CDS
T08119
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113661698
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113661698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PRP1_N
zf-RING_5
rhaM
zf-Nse
U-box
Raptor_N
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
113661698
NCBI-ProteinID:
XP_047676374
LinkDB
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Position
11:complement(22097271..22112335)
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AA seq
588 aa
AA seq
DB search
MAKANISVDQDQLSCPICLDLLNNPVTTPCGHSFCKVCINGCWDQEDVKCVYSCPQCRET
FTPRPVLWRNNMLAEVVEKLKKTELQAASPAHCYAGPGDVECDFCTGRKHKAVKSCLDCL
ASFCEDHLKPHYLSPAFKKHKLVEACAELQEKICSEHNKLMEIYCRTDQSLICYLCMMEE
HKGHDTVSAKAERTKKQNELKEEQMKCQQRIQETQKKVQELKQTVESVMKRSQVAVDHSE
RIFTQLIRSMKKRRSEMRALFRAQEEAELSRAERLLNQLEQEIADLKRRITEMELSHTHD
DIHFLQSFPSLCVFPKCDDSLSFTVNQHLSFDGVRKSLSDLKKRVKQICEEEFNKIRPQG
EQTNIASLLGYRNIHVTEIRSKQEHDNCHLLNSAAVHVILPSEPKSREHFLQYFRCLTLD
PNTVHHQLILSEKNRVVTCSETQQRYSDHPERFDYWTQVLCKQSVCGRCYWEVEWSGKGM
DISVSYKEISRKGRGNECVFGLNSQSWSLWCSYSSDFFWHNNSKTKLRGPSSSRIGVYVD
HSAGTLSFYSVSDTMRLLHRVHTTFTQPLYAGFRLCYNNSTLMLCDQV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggccaatatttcagtagatcaggatcagttgagctgtccaatttgtctggat
cttctgaataatccagtgactactccctgtggtcacagtttctgtaaggtgtgtattaat
ggctgctgggatcaagaggatgtaaagtgtgtctacagctgtcctcagtgtagagagact
ttcactccaaggcctgttctatggaggaacaacatgctggctgaagtggtggagaaactg
aagaagactgaactccaagctgcttctcctgctcactgttacgctggacctggagatgtg
gagtgtgatttctgcacagggagaaaacacaaagctgtcaagtcctgtctggattgtctg
gcctccttttgtgaagatcatcttaaacctcactatctgtctcctgcctttaagaagcac
aagttagttgaagcctgtgcagagctccaagagaagatctgctctgaacataacaaactg
atggagatctactgtcgtactgaccaaagcctcatctgttacttgtgtatgatggaagaa
cacaaaggccatgatacagtttcagctaaagcagaaagaactaaaaaacagaatgagtta
aaggaggagcagatgaaatgccagcagaggatccaggagacacagaagaaagtgcaggag
ctgaaacaaactgtggagtctgttatgaagcgttcacaggtagcagtagatcacagtgag
aggatctttactcagctgatcagatccatgaagaaaaggcgctctgagatgagggcgctg
ttcagagctcaggaggaagctgaattgagtcgagctgaacgactcctgaatcaactggag
caggagattgctgatcttaagaggagaataactgagatggagctttcgcacacacacgat
gacatccacttcctccagagtttcccgtctctctgtgtttttcctaaatgtgacgactca
cttagcttcactgtcaatcaacatctctcatttgatggagtgaggaaatctctctcagat
ctgaaaaaacgagtcaagcaaatctgtgaggaggaattcaacaaaatcagaccacaaggt
gaacaaactaacattgcttctttactgggatacagaaacattcatgtaactgaaataaga
agtaagcaggaacatgacaattgtcatctactcaactctgcagcagttcatgtgatttta
ccttcagaaccaaagagcagagaacattttctgcagtatttccgttgtctgacgctggat
ccaaacacagtacatcatcaactcattctgtctgagaagaacagagtggtgacatgcagt
gagacacaacagcgatactctgatcatccagagagatttgactattggactcaggtgttg
tgtaagcagagtgtgtgtggacgctgttactgggaggtggagtggagtggtaagggcatg
gacatatcagtgtcatataaagagatcagcaggaaaggacggggtaatgagtgtgtgttt
ggactcaatagtcagtcctggagtctgtggtgttcttattcctctgactttttctggcac
aacaacagtaaaactaagctccgtggtccatcatcctccagaataggagtgtatgtggat
cacagtgcaggaactctgtccttctacagcgtctctgacaccatgaggctcctccacaga
gtccacaccacattcactcagcctctatacgctgggttccggttatgctataataactca
actctaatgttatgtgatcaagtttaa
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