Tachysurus fulvidraco (yellow catfish): 113662258
Help
Entry
113662258 CDS
T08119
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113662258
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113662258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
OmpH
DUF4407
TMPIT
Fib_alpha
REST_helical
LMBR1
Motif
Other DBs
NCBI-GeneID:
113662258
NCBI-ProteinID:
XP_027032799
LinkDB
All DBs
Position
1:complement(44732159..44741767)
Genome browser
AA seq
556 aa
AA seq
DB search
MAEANIFVAQDHFSCPICLDLLKDPVTLSCGHSFCMFCINGCWDQEDQQGVYSCPQCRQT
FTQRPVVSKNSVLAEVVETLKKTGLQATQPAQCLAGPEDVKCDFCIESKCKAIKSCLVCL
ASFCETHLQPHYESPAFKKHKLVEASRRLQDQICSQHDKLLEFYCRTDQQCICMLCMIDK
HKGHDTVSATAGRAEKQKQLLAVQGKYQQRIQEREKELQELTKAVESHKHSAETAVQESE
KTFTDLIKTLERRRSEVTALIRAQEKAAVSQAEEVMKKLEEEIVELKRRNAEMEEFSHVE
DPIYFLQNFRAISAPLQHADLPTITVNSLHTFEDVIKSVSELRNNLENHYKERTEKMSSQ
VKKVRVIPPQSRGEFLEYSVQFTLDPNTANFYLLLSGGNTVVTNCSSVVTYCNPPESFDC
YSQVLCSESVSGYSYWEVEWSGVNGVHIAVSYKNISRKGSSNECAFGRNDKSWSLLCQSS
GYSFLHNNQETKIHMSSIPSRIGVFVDHKAGILSFYSVSDKMKLLHKTKCKFTQPLYPGF
MVNSKSTVRLNKIRLD
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgaatattttcgttgctcaggatcatttcagctgtccaatctgtctagac
ctactcaaggatccagtaactctttcgtgtggacacagtttctgtatgttctgtattaat
ggctgctgggatcaggaggatcagcagggagtctatagctgtcctcagtgtagacaaacc
ttcactcagagacctgttgtaagtaaaaacagtgtcctagctgaagtagtggagacactg
aagaagacaggactccaagctacacaacctgctcagtgtttagctggacctgaagatgtg
aaatgtgatttctgtattgagagtaaatgcaaagccatcaagtcctgcctggtgtgtctg
gcctctttctgtgaaactcatctccagcctcactatgaatctcctgcctttaagaagcac
aagctggtcgaagcctccagacgactccaggatcagatctgctctcagcatgacaaactg
ctggagttttactgtcgcactgatcagcagtgtatctgcatgttgtgtatgatagataaa
cataaaggacatgatacagtatcagctacagcaggacgagctgagaaacagaagcagttg
ttggcggtgcagggaaaataccagcagagaatccaggaaagagagaaagagcttcaagaa
ctaacaaaagctgtggagtctcacaagcactctgctgaaacggcagtgcaggaaagtgag
aagacatttactgatctgatcaaaacacttgagagaagacgctctgaggtgacagcactg
atcagagctcaggagaaagctgcagtgagccaagctgaagaagtcatgaagaaactggag
gaggagattgtagagctgaagaggagaaatgctgagatggaggagttttcacatgtcgag
gatcccatttattttctccagaactttcgggcaatctcagctcctcttcaacatgcagac
ttacccaccatcacagtgaattctctccatacgtttgaagatgtaataaaatctgtgtct
gaattgagaaataacctagaaaaccactacaaagaaaggactgagaagatgtcaagtcaa
gtgaagaaagttcgagtgattccccctcaaagcagaggagagtttttagaatattctgtc
cagttcacactggatcccaatacagctaatttttaccttcttctgtctggtgggaacaca
gtggtgactaactgttcatcagtagtgacatactgtaatcctccagagagttttgactgt
tactcccaggtgttgtgtagtgagagtgtgtctggatactcttactgggaggtggagtgg
agtggggttaatggggttcatatagcagtgtcttataaaaacatcagcaggaagggaagc
agtaatgaatgtgcgtttggacgtaatgataagtcctggagtttgctttgccaatcatct
ggttactcattcttacacaacaaccaagaaaccaaaatccacatgagctccatcccctct
aggataggagtgtttgtggatcacaaggcaggaattttgtctttctacagcgtctctgac
aagatgaagctgctccacaaaaccaagtgcaaattcactcagcctctttatccagggttc
atggtcaattccaagtcgactgtaagattaaataagattagattagattag
DBGET
integrated database retrieval system
