Thermosipho ferrireducens: JYK00_00990
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Entry
JYK00_00990 CDS
T07656
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tfe
Thermosipho ferrireducens
Pathway
tfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYK00_00990 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfe03019
]
JYK00_00990 (rny)
Messenger RNA biogenesis [BR:
tfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JYK00_00990 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QTA38151
LinkDB
All DBs
Position
196688..198220
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AA seq
510 aa
AA seq
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MLTYILTALGVVIGLLFGYVIARRKIEHELLISRKDAEHIIKEAEKEANEIKKRAVIESR
EELHKLREEWEKERRIREEELRHNEERLLKREEMLAKREELLDKKENYIENLRVELETRQ
KEIAEKERVLEEKFQKLAGITQEQAREMVLQEARERYEHEIAKVYSQIKMRYEEDAEKYA
KKVIADAIQRYAPEYAGEITVSTIMLPNDDMKGRLIGREGRNIRAFEKVTGVDLIIDDTP
EMVTVSCFNPLRREIARRTVEKLVADGRIHPTRIEEMYEKSKSEVEKLIKEAGQEATFVT
GVGGLHPEIIKLLGRLKFRTSYGQNVLSHSIEVALIAGLIASELGLNVEKAKRGALLHDI
GKALDHEVEGSHTVIGAEILKRYGETRDVINMVMAHHGEEEPMSPEAVIVAAADALSAAR
PGARREDVENYIKRLIKLEEIAKSFKYVENAYAIQAGREVRVIVQPDKVDDTLAEKLSHD
IAMKIEEELQYPGVLKVVVIREKRSVAYAK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgttaacatatatactaactgctttaggggttgttattggcttattattcggatatgtt
attgccaggagaaaaatagaacatgagttgctcatctcaagaaaagatgcagaacacata
attaaagaagctgaaaaagaagctaatgaaattaagaaaagagcagtaatagaatcccgc
gaagaactacacaaactaagagaagaatgggaaaaagaaagaaggattcgcgaagaggaa
ttaagacataatgaagaaagactattaaaaagagaagaaatgctcgcaaaaagagaagaa
ctccttgataaaaaggaaaattacatagaaaatctcagagtagaattggaaacaagacag
aaagaaatagctgaaaaagaacgtgttcttgaggaaaaatttcaaaagcttgctggtata
actcaggaacaggcaagagaaatggttcttcaagaagcaagagaacggtacgaacatgaa
attgccaaagtttattctcaaataaaaatgagatacgaagaagatgcagaaaagtatgca
aaaaaggttatagccgatgctattcaacgatatgccccggaatatgcgggcgaaattacc
gttagtactataatgctaccaaatgacgacatgaaaggacgactcataggaagagaagga
agaaatattagagcatttgaaaaagtaacaggagtagatctcataatagatgatactccg
gaaatggtaacagttagctgttttaatcctctaaggcgcgaaattgcaagaagaactgtt
gaaaagcttgtagccgatggaagaattcatccaacaagaatagaagaaatgtatgaaaaa
tctaaatcagaagttgaaaaacttatcaaagaagcgggacaggaagcaacctttgtaaca
ggtgtcggaggattacaccctgaaattataaaacttcttggacggttaaaattcaggaca
agttacggtcagaacgtcctttctcactcgattgaagtagctttaatagctggactaatt
gcctccgaactcggattaaacgtagaaaaggcaaaaagaggagcactattacatgatata
ggtaaggctcttgaccatgaagttgaaggttcacataccgttattggcgctgaaatcttg
aaaagatacggtgaaacaagagatgttattaacatggtaatggcacatcatggtgaagaa
gaaccaatgagccctgaagcagttatagttgcagcagcagatgctctttcagctgcaaga
ccgggagcaagacgtgaagacgttgaaaactacataaagagattaataaaattagaagaa
atagcgaaaagctttaaatacgttgaaaatgcgtatgcaatacaggctggtagagaagta
agagtaatagttcaacctgataaagttgatgacactcttgcagaaaagttgtcacatgat
attgcaatgaaaatagaggaagaacttcaataccctggcgttttgaaagtagttgtaatt
agagaaaaacgaagtgttgcatatgccaagtaa
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