KEGG   Thermosipho ferrireducens: JYK00_00990
Entry
JYK00_00990       CDS       T07656                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
tfe  Thermosipho ferrireducens
Pathway
tfe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tfe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JYK00_00990 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfe03019]
    JYK00_00990 (rny)
Messenger RNA biogenesis [BR:tfe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JYK00_00990 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH Cas3_HD
Other DBs
NCBI-ProteinID: QTA38151
LinkDB
Position
196688..198220
AA seq 510 aa
MLTYILTALGVVIGLLFGYVIARRKIEHELLISRKDAEHIIKEAEKEANEIKKRAVIESR
EELHKLREEWEKERRIREEELRHNEERLLKREEMLAKREELLDKKENYIENLRVELETRQ
KEIAEKERVLEEKFQKLAGITQEQAREMVLQEARERYEHEIAKVYSQIKMRYEEDAEKYA
KKVIADAIQRYAPEYAGEITVSTIMLPNDDMKGRLIGREGRNIRAFEKVTGVDLIIDDTP
EMVTVSCFNPLRREIARRTVEKLVADGRIHPTRIEEMYEKSKSEVEKLIKEAGQEATFVT
GVGGLHPEIIKLLGRLKFRTSYGQNVLSHSIEVALIAGLIASELGLNVEKAKRGALLHDI
GKALDHEVEGSHTVIGAEILKRYGETRDVINMVMAHHGEEEPMSPEAVIVAAADALSAAR
PGARREDVENYIKRLIKLEEIAKSFKYVENAYAIQAGREVRVIVQPDKVDDTLAEKLSHD
IAMKIEEELQYPGVLKVVVIREKRSVAYAK
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgttaacatatatactaactgctttaggggttgttattggcttattattcggatatgtt
attgccaggagaaaaatagaacatgagttgctcatctcaagaaaagatgcagaacacata
attaaagaagctgaaaaagaagctaatgaaattaagaaaagagcagtaatagaatcccgc
gaagaactacacaaactaagagaagaatgggaaaaagaaagaaggattcgcgaagaggaa
ttaagacataatgaagaaagactattaaaaagagaagaaatgctcgcaaaaagagaagaa
ctccttgataaaaaggaaaattacatagaaaatctcagagtagaattggaaacaagacag
aaagaaatagctgaaaaagaacgtgttcttgaggaaaaatttcaaaagcttgctggtata
actcaggaacaggcaagagaaatggttcttcaagaagcaagagaacggtacgaacatgaa
attgccaaagtttattctcaaataaaaatgagatacgaagaagatgcagaaaagtatgca
aaaaaggttatagccgatgctattcaacgatatgccccggaatatgcgggcgaaattacc
gttagtactataatgctaccaaatgacgacatgaaaggacgactcataggaagagaagga
agaaatattagagcatttgaaaaagtaacaggagtagatctcataatagatgatactccg
gaaatggtaacagttagctgttttaatcctctaaggcgcgaaattgcaagaagaactgtt
gaaaagcttgtagccgatggaagaattcatccaacaagaatagaagaaatgtatgaaaaa
tctaaatcagaagttgaaaaacttatcaaagaagcgggacaggaagcaacctttgtaaca
ggtgtcggaggattacaccctgaaattataaaacttcttggacggttaaaattcaggaca
agttacggtcagaacgtcctttctcactcgattgaagtagctttaatagctggactaatt
gcctccgaactcggattaaacgtagaaaaggcaaaaagaggagcactattacatgatata
ggtaaggctcttgaccatgaagttgaaggttcacataccgttattggcgctgaaatcttg
aaaagatacggtgaaacaagagatgttattaacatggtaatggcacatcatggtgaagaa
gaaccaatgagccctgaagcagttatagttgcagcagcagatgctctttcagctgcaaga
ccgggagcaagacgtgaagacgttgaaaactacataaagagattaataaaattagaagaa
atagcgaaaagctttaaatacgttgaaaatgcgtatgcaatacaggctggtagagaagta
agagtaatagttcaacctgataaagttgatgacactcttgcagaaaagttgtcacatgat
attgcaatgaaaatagaggaagaacttcaataccctggcgttttgaaagtagttgtaatt
agagaaaaacgaagtgttgcatatgccaagtaa

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