Tessaracoccus flavus: RPIT_07075
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Entry
RPIT_07075 CDS
T04688
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPIT_07075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfl03019
]
RPIT_07075
Messenger RNA biogenesis [BR:
tfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RPIT_07075
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
KhpA-B_KH
HK97-gp10_like
Motif
Other DBs
NCBI-ProteinID:
AQP44605
UniProt:
A0A1Q2CEX7
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Position
complement(1537744..1539351)
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AA seq
535 aa
AA seq
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MQELGWIIAGVLLVGLLGLAWLWRRSAAQSLQERDSWERRSRDDMNTMRASAQAAATSIR
EDAERVLAQAQARSREAMEDVERRRAEMEASLAAQRAELRESRAAQERRESRLHEREDRL
AAELEGLDARLQRMEVQRAQLKEQREEARAEREQAAAELERIAGLTHAEARAEVVAEAER
QAKLTATAIARDIEATAKRDADKLARSIVVTAIQRVASEQTSESVVSTVHLPSDDMKGRI
IGREGRNIRAFEQITGVNVLIDDTPESVLLSSFDPVRREAARLTLVDLVADGRIHPARIE
EVFERSERRISERIERAAEDALTEVGIVDLHPDLVPIIGSLAFRTSYGQNVLRHLVECAH
LAGVMAAELGLDVATCKRAAFLHDIGKALTHEVEGPHAIIGAELLRKHGEHDDIVHAVEA
HHNEVEPRTVEAILTQAADAISGSRPGARRESLEAYVERMENLETIATSHDGVVRAYAMQ
AGREVRVMVAPEDVDDAGAQGLARDIAREIERNLSYPGQIRITVVRESRATETAH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaactgggatggatcatcgcgggtgtgctgctggtcggcctactggggttggcc
tggctctggcggcggagcgcggcgcagtcactgcaggagcgcgactcctgggagcggcgc
tcgcgcgacgacatgaacacgatgcgggcctcggcgcaggcggcggccaccagcatccgc
gaggacgccgagcgcgtgctggcccaggcgcaggcccgctccagggaagcgatggaggac
gtcgagcgccgcagggcggagatggaggcgagcctcgcggcccagcgggctgagctgcgg
gaatcgagggcagcccaggagcggcgggagtcccgcctccacgaacgcgaagaccggctg
gccgcggaactcgaggggctcgacgcccggctgcagcgcatggaggtgcagcgcgcgcaa
ctgaaggagcagcgcgaggaggctcgcgccgagcgggagcaggccgcggcggaactcgaa
cggatcgccggactcacccacgccgaggcgcgcgccgaggtggtcgccgaggcggagcgg
caggcgaagctgacggccaccgcgatcgcccgcgacatcgaggccaccgccaagcgcgac
gctgacaagctggcccgctccatcgtcgtcaccgccatccagcgggtggcctccgagcag
acgagcgagtcggtcgtctccaccgtgcacctgccgagcgacgacatgaagggccggatc
atcggccgggagggccgcaacatccgggcgttcgagcagatcaccggcgtcaacgtcctc
atcgacgacactcccgaatcggtgctgctgagcagcttcgacccggtccgccgcgaggcc
gcgcggctgacgctggtggatctcgtggccgacggccgcatccacccggcccgcatcgag
gaagtgttcgagcggagcgagcgccgcatcagcgaacggatcgagcgggccgccgaggac
gcgctcaccgaagtgggcatcgtcgacctgcaccctgacctcgtgccgatcatcggctcg
ctggcgtttcgcacctcatacggccagaacgtgctcaggcacctcgtcgagtgcgcacac
ttggccggcgtcatggccgccgaactcgggctggacgtggccacgtgcaagcgcgcggcc
ttcctccacgacatcggcaaggcgctcacccacgaggtcgaagggcctcacgcgatcatc
ggcgccgagctgctgcgcaagcacggggagcacgacgacatcgtgcacgccgtcgaggcg
caccacaacgaggtggagccccgcaccgtcgaggccatcctcacccaggccgcggacgcc
atctccggctcacgccccggcgcgcggcgggagtcgctcgaggcctacgtcgagcgtatg
gagaacctcgagaccatcgccacgtcgcacgacggcgtcgtgcgcgcctacgccatgcag
gccgggcgcgaggtccgggtgatggtcgctcccgaggacgtcgacgacgcaggggcgcag
gggctggcccgcgacatcgcccgcgagatcgagcgcaacctcagttacccgggccagatc
cggatcacggtggtcagggagtcccgggccaccgagacggcccactga
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