Thiorhodovibrio frisius: Thiofri_01259
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Entry
Thiofri_01259 CDS
T09561
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri00521
Streptomycin biosynthesis
tfri00523
Polyketide sugar unit biosynthesis
tfri00541
O-Antigen nucleotide sugar biosynthesis
tfri01100
Metabolic pathways
tfri01110
Biosynthesis of secondary metabolites
tfri01250
Biosynthesis of nucleotide sugars
Module
tfri_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Thiofri_01259 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Thiofri_01259 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Thiofri_01259 (rmlC)
Enzymes [BR:
tfri01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Thiofri_01259 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WPL21149
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All DBs
Position
complement(1255510..1256082)
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AA seq
190 aa
AA seq
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MNILTTALPDVLIIEPQVFGDERGFFVETWQQERYAEAGIGPEFVQDNLAYSRQGVLRGL
HLQNPYAQGKLVQVLQGEVFDVAVDVRRGSPSFGRWHGCLLSGENKRQFWVPAGFAHGYL
VTGEDALFNYKCTDAYHPETQFSVRWDDPAIGIDWPLKGDPILSDADRAALPLAEITPER
LPVFDPAAHS
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattctcaccacagcgctgccagacgtcctcatcatcgaaccccaggtctttggc
gacgagcgcggcttttttgtcgagacctggcagcaggagcgctacgccgaggccggcatc
ggcccggagtttgtgcaggacaatctggcctattcccgccaaggcgtgctgcgcgggctg
catctgcagaacccctacgcccaagggaaactagtgcaagtgctgcaaggcgaggtcttc
gatgtcgccgtcgatgtgcgtcgtggctcgccgagcttcgggcgttggcatggctgcctt
ctgagcggcgagaacaaacgccagttctgggtgccagccggcttcgcccacggctatctg
gtcaccggcgaagatgcgctctttaactacaagtgcaccgacgcctaccaccccgagacc
cagttctcggtgcgttgggacgacccagctattggcatcgactggccgttgaaaggtgac
cccatcctgtcagatgccgaccgcgccgccttacccctggccgagatcaccccggagcga
ttgccagtgttcgaccccgccgcccacagctga
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