Thiorhodovibrio frisius: Thiofri_01509
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Entry
Thiofri_01509 CDS
T09561
Symbol
rlmE
Name
(GenBank) Ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfri03009
]
Thiofri_01509 (rlmE)
Enzymes [BR:
tfri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
Thiofri_01509 (rlmE)
Ribosome biogenesis [BR:
tfri03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Thiofri_01509 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltransf_23
PCMT
Methyltransf_25
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
WPL21384
LinkDB
All DBs
Position
1568745..1569392
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AA seq
215 aa
AA seq
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MAVRSKSSQRWLERQRRDPYVKQAQSEGYRSRAAYKFLEIDAKDRLLRPGMRVLDLGAAP
GGWSQVLAAGVGSRGQVIALDLLPMDPVPGVVFIQGDFTEDEPLERIHAALNGEFVDLVL
SDMAPNISGMRAVDQPRSVHLCELALDLATRVLQSGGHLVIKAFHGEGFDQLVRELRRCF
ERVVTRKPDASRANSRETYLVATGFRSACRSPVRG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcgaagcaaaagcagccagcgctggcttgagcgccagcgtcgtgacccctat
gtcaagcaggcgcaatccgagggttatcgctcgcgggctgcctataagttcctggaaatc
gacgcgaaagaccggctgctgcgcccgggaatgcgggtgcttgacctgggcgctgcccca
ggcggctggtcacaggttctggcggctggtgttgggagtcgtgggcaggtgattgcactt
gacctgttgccgatggaccctgtgccgggcgtggtttttattcagggggatttcaccgag
gatgagcccctggaacggatccatgcggctctgaatggagaatttgttgaccttgtgctt
tccgacatggccccaaatatctcgggaatgcgggcggtggatcaaccgcgctcagtgcat
ctttgcgagttggcactggacttggcaaccagagtgctgcaatctggcggtcatctggtg
atcaaggcgtttcatggcgaagggtttgaccaactggtgcgcgaattgcgacgctgtttc
gagcgggtcgtcacgcgcaagccagacgcctcgcgggccaacagccgtgaaacctatctg
gttgccacgggttttcgctcagcatgccgatcgccggttcggggttga
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