Thiorhodovibrio frisius: Thiofri_03679
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Entry
Thiofri_03679 CDS
T09561
Symbol
liaR_3
Name
(GenBank) Transcriptional regulatory protein LiaR
Organism
tfri
Thiorhodovibrio frisius
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
Sigma70_r4
HTH_24
HTH_20
NACHT
ABC_tran
nSTAND3
AAA_22
HTH_5
AAA
DUF2089
HTH_11
DUF742
AAA_30
AAA_18
HTH_40
ATP_bind_1
BrxC_BrxD
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
WPL23491
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Position
complement(3947281..3948954)
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AA seq
557 aa
AA seq
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MSKSSSAHGENGAPRALALTPRQRQILGLMCKGKVNKEIANELDISLGTVKQHIAALFKR
MQVQNRSMAVAQGKDMFDDSAARDSGSAVAGADWADDIMLIRRPCVVLAVRISRTLNANG
QAQVRELVKALAAEMGAFHLPGGDEINILLFGVRRPSVWDAIKALLLLQQLHKQALGQGL
CDTGAMAAALDGGMAVISINARGRWSGDTVATPVISMTRRLLGNCPGGMLTLGVNARHLL
ESLHAFNGKAAGSRLPLGALNKAFAADLGSVPGELLYPNQAGELETPSGKLRQLVGPLGS
GKSHLCRYLVARARMQGRLTRYLRLMPAAPAAGFWDADTGRPVSVEDAIQALDAPPGPGL
NILVIDDIDLLDSQEARQDLMDRLQPALAQGCLVILTARTQILKDAESIRVQGIDSDDLE
GFLLSCRPHLGGDENNTASRAENQDHTVLLELTEGLPLFLLELSKNSHHSITLPVLLAIA
TELDQHPLDWRVLRILVQSTEEPTPSRIQSLTGLPLTDVDQSVRVAVDAGLLHLAGTDQL
IRFSKPLMQRGIASILI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcatccagcgctcatggagagaacggagccccgcgcgcgctcgcgctgaca
ccgcggcagcgccagattctgggcttgatgtgtaaagggaaggtgaacaaggaaattgcc
aacgagctagacattagcctcggcaccgtcaagcagcatatcgccgcactgttcaagcgg
atgcaggtccagaaccgcagtatggcggtcgctcagggtaaagatatgttcgatgactcc
gctgcccgcgatagcgggtcagcggttgcgggtgccgactgggccgatgatattatgctc
atccgtcgtccctgcgtcgtgcttgctgttcgcatttcgcgcacgctgaatgcgaatgga
caagcgcaggtcagggagttggtcaaggctttggcggctgagatgggggcgtttcacctg
cctggcggggacgagatcaatatcctgctgtttggtgtgcgcagaccctcagtctgggat
gcaatcaaggccttgcttctgctgcaacaattgcacaagcaggcgctggggcagggtttg
tgcgacacaggtgccatggcggccgccctcgacggcggaatggccgttatcagcattaac
gcccgcggacgctggtccggcgacacagtagccaccccggtcatttccatgacacggcgc
cttctgggcaattgcccggggggcatgctgacgctcggggtgaatgctcggcacctgctt
gagagcctccatgcattcaatggcaaggctgccggtagccgccttccgctcggggcgctc
aataaagcctttgctgcggacttgggctcggtacccggtgagcttttgtacccaaatcag
gcaggagaacttgagaccccgtccggcaagctgcggcaattggtggggcctctggggagt
ggcaaatcgcatctctgccggtatctggtcgcccgcgcccggatgcaggggcgccttacc
cggtatttgcggctgatgcccgctgcgcccgcagcaggtttctgggatgccgataccggc
aggccggtctcagtcgaagatgccattcaggccctggatgcccccccgggaccggggcta
aatatcttggtgatcgacgacattgacctgcttgactcgcaggaagcgcgacaagacttg
atggatcgattgcagcccgccttggcccaaggctgtctggtaatccttacagcgcgtacc
caaattctcaaagatgccgagtccatcagggtgcaaggcatcgactcggatgatctggaa
gggttcttgttatcatgcagaccgcacctgggtggggatgaaaacaacacggcctctcgc
gcagagaatcaggatcatactgtcttgctggagcttaccgaggggcttccgctattcttg
ctggagctgagtaaaaactctcatcacagcatcacattaccggtgttgctcgccattgcc
accgagctggaccagcatcccctggactggcgagtattgcgaattttggtgcaatcgacc
gaagagccgacgccgagccgcattcagagcctcactggcctgccgctaacggatgttgat
cagagcgtgcgagtggcggttgacgcgggtctactgcatcttgcaggaaccgatcaactt
atccgcttctcaaagcctcttatgcagcgagggattgcttcgatcttgatctga
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