Thiorhodovibrio frisius: Thiofri_04527
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Entry
Thiofri_04527 CDS
T09561
Symbol
ligA_2
Name
(GenBank) DNA ligase
KO
K26441
DNA ligase [EC:
6.5.1.1
]
Organism
tfri
Thiorhodovibrio frisius
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Thiofri_04527 (ligA_2)
Enzymes [BR:
tfri01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Thiofri_04527 (ligA_2)
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_OB_2
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
WPL24310
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All DBs
Position
4834823..4835758
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AA seq
311 aa
AA seq
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MPSVVLAPGRTRLRLSIFFLLILVAPAPLWSDARNNQPDTGISEAAATAHPHPPTPPALM
LAKTHQAGTDVAHYWVSEKLDGVRARWDGSRLISRGGHVIQAPDWFVAGFPSVPLDGELW
LGRGQFALMSGLARRQEPDEDAWREVRFMVFDLPTLDAPFSERLVELQRLLADAPSERIA
LIEQFRVADEKALLAHLAAVERLGGEGLMLHHEDARYREGRSSDLLKVKSKQDAEAKVLA
HLPGRGKYQGMLGALLVQDDQGRRFRIGTGFSDAERRNPPPIGSTITFQYQGETKTGLPR
FASYLRLREAE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgtcgtattagcgcccgggcgcacccggctccgcctgagtattttctttctg
ctaatactggtcgcaccggcaccgctctggagtgacgcgcgcaacaatcagcctgacacc
gggatcagcgaagcagcagccaccgcacacccgcatccacccacaccgccggcactgatg
ctggccaaaactcaccaagcgggcaccgatgtcgcacattactgggtgagcgaaaagctc
gacggcgtgcgcgcccgctgggacggcagccgcctgatcagtcgcggcggccatgtcatc
caggcaccggattggttcgtcgctggctttccgtccgtgccactcgacggcgaactctgg
ctcgggcgcggccagttcgcgctcatgtccggcctggcgcgacgccaagagccggacgaa
gacgcttggcgcgaagtacgcttcatggtgttcgacctgccaaccttggacgcccccttc
agcgaacggctggtcgagctgcaacgcctgcttgccgacgcaccctccgagcgcatcgcc
ctgatcgagcaatttcgcgtcgccgacgagaaagcactgttggcacatctcgccgccgtc
gagaggcttggcggcgaaggcctgatgctccaccatgaagatgcgcgctaccgcgagggc
cgctccagcgacctgctcaaagtcaaatccaagcaggatgccgaagccaaagtcctggct
cacctgcccgggcgcggcaaataccaaggcatgctcggcgccctgctggtccaggacgac
caaggccgacgctttcgcatcggcaccggcttcagcgacgccgaacgccgcaacccgcca
cccatcggcagcaccatcacttttcaataccaaggcgagaccaagaccggcctcccccgc
ttcgcaagctacctgcgtctgcgcgaggcagaatag
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