Takifugu flavidus (sansaifugu): 130514479
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Entry
130514479 CDS
T09160
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130514479
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130514479
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Calcipressin
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
130514479
NCBI-ProteinID:
XP_056870064
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All DBs
Position
18:217857..263743
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AA seq
460 aa
AA seq
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MLMSTDVPSIIISVTRGIMDREKDIDTTAEHLGGASGVPTTVRGMKRGDPEPDTQAAAPL
TDLAGAECKRPRIDGTVSVDVGQNNEPLNHAFHGCPSHSQGSQDSLSGQEGITPPFSVFP
PLPPPQNGMPESEFNPGTMFAAGSQGATDISAGGNGTTPTATSNCNDDKIEEPSQGEASL
QCGPGGPAGDPNEAKGTPKRLHVSNIPFRFRDPDLRQMFGHFGKILDVEIIFNERGSKGF
GFVTFENSTDAEKAREKLHGTQVEGRKIEVNNATARVMTNKKMVSPFPNGDALSTLPYAA
WKLSPMVGTVYGPELYAVPGFPYPSAAAATTAAAAAAAAFRGAHLRGRGRPVYSAVRAAL
PQPAIPAYPGVVYQDGFYSAADLYGGYPAAAAAAAAAAAAYRYTQPATVTGATPAAAAYS
DSYGRVYTTDPYHALTPAAAYGVGAMASIYRSGYSRFAPY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttccttctataatcatatccgttactcggggaataatggac
cgggaaaaagacattgacacaacggccgaacacttaggaggcgcaagcggggttccgaca
actgtacgcgggatgaagagaggagatcccgagcccgacactcaggcagccgctcctctg
acggacttagccggggcggagtgcaaaagaccaaggatagacggaaccgtcagtgttgac
gtcggacagaacaatgagcctttaaaccatgctttccatgggtgcccatcacacagtcag
ggttctcaggattcattaagtggacaggaaggaataaccccacctttttcagtgtttcct
cctttaccccctcctcagaatggaatgccagagtcagagtttaacccagggactatgttc
gctgcagggagtcaaggtgccacagacatcagtgctggtggtaatggcaccacccctact
gccacctccaactgtaatgatgacaaaatagaggagccatctcagggggaggcaagttta
cagtgtggaccaggaggccctgcaggagaccccaatgaggccaaagggactcccaaacgc
ctccatgtgtcaaacattcccttccgctttcgggaccctgacctcaggcagatgtttggg
cactttggaaagattcttgatgtagagattattttcaatgagagggggtcaaagggtttt
ggctttgtgacctttgagaatagcactgatgcagagaaagccagagaaaagcttcatggc
acacaagtagaaggtcgaaagattgaggtgaacaatgccactgccagagtgatgactaac
aagaaaatggtcagtcccttcccaaatggagatgctctcagcacgctgccttatgcagcg
tggaagttaagtccaatggtgggaactgtgtatggaccagagctctatgcagttccaggc
tttccttatccctctgcagcagcagcaactacagcagcagcagcagcagctgcagcattt
cgtggtgcccacctcaggggccgaggtcggcctgtgtacagtgcagtgcgagctgctctg
ccacagccagccatccctgcataccctggtgtggtgtatcaggatgggttttacagtgct
gcagacttatatggggggtatcctgctgctgctgccgctgctgctgctgctgccgctgcc
tatcgctacactcagcctgccacagtaaccggagcaactccagcagcagctgcctatagt
gacagttatggccgtgtatacaccacagatccctaccatgctttaactccagctgctgct
tatggggttggagccatggccagtatataccggtcaggatatagtcggtttgctccttat
taa
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